Andrew J. Fisher, Ph. D. - Publications

Affiliations: 
1996- Chemistry, Mol. Cell. Biol. University of California, Davis, Davis, CA 
Area:
Structural Biology
Website:
https://chemistry.sf.ucdavis.edu/people/andrew-fisher

73 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Feng Y, Lyu X, Cong Y, Miao T, Fang B, Zhang C, Shen Q, Matthews M, Fisher AJ, Zhang JZH, Zhang L, Yang R. A precise swaying map for how promiscuous cellobiose-2-epimerase operate bi-reaction. International Journal of Biological Macromolecules. 253: 127093. PMID 37758108 DOI: 10.1016/j.ijbiomac.2023.127093  0.733
2021 Mohanty AK, Choudhary S, Kaushik JK, Fisher AJ. Crystal structure of BRP39, a signaling glycoprotein expressed during mammary gland apoptosis at 2.6 Å resolution. Journal of Structural Biology. 107737. PMID 33838225 DOI: 10.1016/j.jsb.2021.107737  0.322
2020 Feng Y, Hua X, Shen Q, Matthews M, Zhang Y, Fisher AJ, Lyu X, Yang R. Insight into the potential factors influencing the catalytic direction in cellobiose 2-epimerase by crystallization and mutagenesis. Acta Crystallographica. Section D, Structural Biology. 76: 1104-1113. PMID 33135681 DOI: 10.1107/S205979832001222X  0.774
2020 Hurlburt NK, Guan J, Ong H, Yu H, Chen X, Fisher AJ. Structural characterization of a nonhydrolyzing UDP-GlcNAc 2-epimerase from Neisseria meningitidis serogroup A. Acta Crystallographica. Section F, Structural Biology Communications. 76: 557-567. PMID 33135674 DOI: 10.1107/S2053230X20013680  0.813
2020 Thuy-Boun AS, Thomas JM, Grajo HL, Palumbo CM, Park S, Nguyen LT, Fisher AJ, Beal PA. Asymmetric dimerization of adenosine deaminase acting on RNA facilitates substrate recognition. Nucleic Acids Research. PMID 32597966 DOI: 10.1093/Nar/Gkaa532  0.346
2019 Matthews MM, McArthur JB, Li Y, Yu H, Chen X, Fisher AJ. Catalytic Cycle of CMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry. PMID 31583886 DOI: 10.1021/Acs.Biochem.9B00517  0.773
2019 Li Y, Li R, Yu H, Sheng X, Wang J, Fisher AJ, Chen X. Enterococcus faecalis α1-2-mannosidase (EfMan-I): an efficient catalyst for glycoprotein N-glycan modification. Febs Letters. PMID 31552675 DOI: 10.1002/1873-3468.13618  0.365
2018 Monteleone LR, Matthews MM, Palumbo CM, Thomas JM, Zheng Y, Chiang Y, Fisher AJ, Beal PA. A Bump-Hole Approach for Directed RNA Editing. Cell Chemical Biology. PMID 30581135 DOI: 10.1016/J.Chembiol.2018.10.025  0.745
2018 Hurlburt NK, Chen LH, Stergiopoulos I, Fisher AJ. Structure of the Cladosporium fulvum Avr4 effector in complex with (GlcNAc)6 reveals the ligand-binding mechanism and uncouples its intrinsic function from recognition by the Cf-4 resistance protein. Plos Pathogens. 14: e1007263. PMID 30148881 DOI: 10.1371/Journal.Ppat.1007263  0.789
2018 Fisher AJ, Beal PA. Structural basis for eukaryotic mRNA modification. Current Opinion in Structural Biology. 53: 59-68. PMID 29913347 DOI: 10.1016/J.Sbi.2018.05.003  0.404
2018 Lal NK, Nagalakshmi U, Hurlburt NK, Flores R, Bak A, Sone P, Ma X, Song G, Walley J, Shan L, He P, Casteel C, Fisher AJ, Dinesh-Kumar SP. The Receptor-like Cytoplasmic Kinase BIK1 Localizes to the Nucleus and Regulates Defense Hormone Expression during Plant Innate Immunity. Cell Host & Microbe. 23: 485-497.e5. PMID 29649442 DOI: 10.1016/J.Chom.2018.03.010  0.761
2018 McArthur JB, Yu H, Tasnima N, Lee CM, Fisher AJ, Chen X. α2-6-Neosialidase: A sialyltransferase mutant as a sialyl linkage-specific sialidase. Acs Chemical Biology. PMID 29543427 DOI: 10.1021/Acschembio.8B00002  0.302
2016 Fisher AJ, Beal PA. Effects of Aicardi-Goutières Syndrome Mutations Predicted from ADAR-RNA Structures. Rna Biology. 0. PMID 27937139 DOI: 10.1080/15476286.2016.1267097  0.319
2016 Lal NK, Fisher AJ, Dinesh-Kumar SP. Arabidopsis receptor-like cytoplasmic kinase BIK1: purification, crystallization and X-ray diffraction analysis. Acta Crystallographica. Section F, Structural Biology Communications. 72: 738-742. PMID 27710938 DOI: 10.1107/S2053230X16013522  0.341
2016 Kohler AC, Chen LH, Hurlburt N, Salvucci A, Schwessinger B, Fisher AJ, Stergiopoulos I. Structural analysis of an Avr4 effector ortholog offers insight into chitin-binding and recognition by the Cf-4 receptor. The Plant Cell. PMID 27401545 DOI: 10.1105/Tpc.15.00893  0.776
2016 Matthews MM, Thomas JM, Zheng Y, Tran K, Phelps KJ, Scott AI, Havel J, Fisher AJ, Beal PA. Structures of human ADAR2 bound to dsRNA reveal base-flipping mechanism and basis for site selectivity. Nature Structural & Molecular Biology. PMID 27065196 DOI: 10.1038/Nsmb.3203  0.765
2015 Erickson AI, Sarsam RD, Fisher AJ. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry. PMID 26512869 DOI: 10.1021/Acs.Biochem.5B01000  0.435
2015 Ngo A, Fong KT, Cox DL, Chen X, Fisher AJ. Structures of Bacteroides fragilis uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) acyltransferase (BfLpxA). Acta Crystallographica. Section D, Biological Crystallography. 71: 1068-76. PMID 25945572 DOI: 10.1107/S1399004715003326  0.421
2015 Phelps KJ, Tran K, Eifler T, Erickson AI, Fisher AJ, Beal PA. Recognition of duplex RNA by the deaminase domain of the RNA editing enzyme ADAR2. Nucleic Acids Research. 43: 1123-32. PMID 25564529 DOI: 10.1093/Nar/Gku1345  0.328
2014 Huynh N, Li Y, Yu H, Huang S, Lau K, Chen X, Fisher AJ. Crystal structures of sialyltransferase from Photobacterium damselae. Febs Letters. 588: 4720-9. PMID 25451227 DOI: 10.1016/J.Febslet.2014.11.003  0.669
2014 Erickson AI, Sarsam RD, Fisher AJ. Expression, purification and preliminary crystallographic analysis of Mycobacterium tuberculosis CysQ, a phosphatase involved in sulfur metabolism. Acta Crystallographica. Section F, Structural Biology Communications. 70: 750-3. PMID 24915085 DOI: 10.1107/S2053230X14008619  0.354
2014 Phelps KJ, Ibarra-Soza JM, Tran K, Fisher AJ, Beal PA. Click modification of RNA at adenosine: structure and reactivity of 7-ethynyl- and 7-triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chemical Biology. 9: 1780-7. PMID 24896732 DOI: 10.1021/Cb500270X  0.329
2014 Choudhary S, Mohanty A, Fisher A. Crystal Structure of BRP39 protein expressed during Mammary Gland Apoptosis Acta Crystallographica Section A. 70. DOI: 10.1107/S2053273314083612  0.338
2013 Huynh N, Aye A, Li Y, Yu H, Cao H, Tiwari VK, Shin DW, Chen X, Fisher AJ. Structural basis for substrate specificity and mechanism of N-acetyl-d-neuraminic acid lyase from pasteurella multocida Biochemistry. 52: 8570-8579. PMID 24152047 DOI: 10.1021/Bi4011754  0.658
2013 Kabasakal BV, Gae DD, Li J, Lagarias JC, Koehl P, Fisher AJ. His74 conservation in the bilin reductase PcyA family reflects an important role in protein-substrate structure and dynamics Archives of Biochemistry and Biophysics. 537: 233-242. PMID 23911721 DOI: 10.1016/J.Abb.2013.07.021  0.797
2013 Addington TA, Mertz RW, Siegel JB, Thompson JM, Fisher AJ, Filkov V, Fleischman NM, Suen AA, Zhang C, Toney MD. Janus: prediction and ranking of mutations required for functional interconversion of enzymes. Journal of Molecular Biology. 425: 1378-89. PMID 23396064 DOI: 10.1016/J.Jmb.2013.01.034  0.418
2012 Sugiarto G, Lau K, Qu J, Li Y, Lim S, Mu S, Ames JB, Fisher AJ, Chen X. A sialyltransferase mutant with decreased donor hydrolysis and reduced sialidase activities for directly sialylating LewisX. Acs Chemical Biology. 7: 1232-40. PMID 22583967 DOI: 10.1021/Cb300125K  0.435
2011 Griswold WR, Fisher AJ, Toney MD. Crystal structures of aspartate aminotransferase reconstituted with 1-deazapyridoxal 5'-phosphate: internal aldimine and stable L-aspartate external aldimine. Biochemistry. 50: 5918-24. PMID 21627105 DOI: 10.1021/Bi200436Y  0.336
2010 Kohler AC, Gae DD, Richley MA, Stoll S, Gunn A, Lim S, Martin SS, Doukov TI, Britt RD, Ames JB, Lagarias JC, Fisher AJ. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants. Biochemistry. 49: 6206-18. PMID 20557110 DOI: 10.1021/Bi100728Q  0.781
2009 Gay SC, Segel IH, Fisher AJ. Structure of the two-domain hexameric APS kinase from Thiobacillus denitrificans: structural basis for the absence of ATP sulfurylase activity. Acta Crystallographica. Section D, Biological Crystallography. 65: 1021-31. PMID 19770499 DOI: 10.1107/S0907444909026547  0.684
2009 Gay SC, Fribourgh JL, Donohoue PD, Segel IH, Fisher AJ. Kinetic properties of ATP sulfurylase and APS kinase from Thiobacillus denitrificans. Archives of Biochemistry and Biophysics. 489: 110-7. PMID 19664586 DOI: 10.1016/J.Abb.2009.07.026  0.662
2009 Stoll S, Gunn A, Brynda M, Sughrue W, Kohler AC, Ozarowski A, Fisher AJ, Lagarias JC, Britt RD. Structure of the biliverdin radical intermediate in phycocyanobilin:ferredoxin oxidoreductase identified by high-field EPR and DFT. Journal of the American Chemical Society. 131: 1986-95. PMID 19159240 DOI: 10.1021/Ja808573F  0.336
2009 Mohanty AK, Fisher AJ, Yu Z, Pradeep MA, Janjanam J, Kaushik JK. Cloning, expression, characterization and crystallization of BRP39, a signalling glycoprotein expressed during mammary gland apoptosis. Protein Expression and Purification. 64: 213-8. PMID 19041398 DOI: 10.1016/J.Pep.2008.11.001  0.639
2008 Yu Z, Lemongello D, Segel IH, Fisher AJ. Crystal structure of Saccharomyces cerevisiae 3'-phosphoadenosine-5'-phosphosulfate reductase complexed with adenosine 3',5'-bisphosphate. Biochemistry. 47: 12777-86. PMID 18991405 DOI: 10.1021/Bi801118F  0.71
2008 Wingard JN, Ladner J, Vanarotti M, Fisher AJ, Robinson H, Buchanan KT, Engman DM, Ames JB. Structural insights into membrane targeting by the flagellar calcium-binding protein (FCaBP), a myristoylated and palmitoylated calcium sensor in Trypanosoma cruzi. The Journal of Biological Chemistry. 283: 23388-96. PMID 18559337 DOI: 10.1074/Jbc.M803178200  0.329
2007 Murata K, Fisher AJ, Hedrick JL. Crystallization and X-ray analysis of the salmon-egg lectin SEL24K. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63: 396-8. PMID 17565179 DOI: 10.1107/S1744309107015345  0.33
2007 Ni L, Chokhawala HA, Cao H, Henning R, Ng L, Huang S, Yu H, Chen X, Fisher AJ. Crystal structures of Pasteurella multocida sialyltransferase complexes with acceptor and donor analogues reveal substrate binding sites and catalytic mechanism. Biochemistry. 46: 6288-98. PMID 17487984 DOI: 10.1021/Bi700346W  0.645
2007 Tu SL, Rockwell NC, Lagarias JC, Fisher AJ. Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements Biochemistry. 46: 1484-1494. PMID 17279614 DOI: 10.1021/Bi062038F  0.407
2007 Yu Z, Lansdon EB, Segel IH, Fisher AJ. Crystal structure of the bifunctional ATP sulfurylase-APS kinase from the chemolithotrophic thermophile Aquifex aeolicus. Journal of Molecular Biology. 365: 732-43. PMID 17095009 DOI: 10.1016/J.Jmb.2006.10.035  0.817
2006 Ni L, Sun M, Yu H, Chokhawala H, Chen X, Fisher AJ. Cytidine 5'-monophosphate (CMP)-induced structural changes in a multifunctional sialyltransferase from Pasteurella multocida. Biochemistry. 45: 2139-48. PMID 16475803 DOI: 10.1021/Bi0524013  0.632
2005 Liu W, Peterson PE, Langston JA, Jin X, Zhou X, Fisher AJ, Toney MD. Kinetic and crystallographic analysis of active site mutants of Escherichia coli gamma-aminobutyrate aminotransferase. Biochemistry. 44: 2982-92. PMID 15723541 DOI: 10.1021/Bi048657A  0.394
2004 Liu W, Peterson PE, Carter RJ, Zhou X, Langston JA, Fisher AJ, Toney MD. Crystal structures of unbound and aminooxyacetate-bound Escherichia coli gamma-aminobutyrate aminotransferase. Biochemistry. 43: 10896-905. PMID 15323550 DOI: 10.1021/Bi049218E  0.398
2004 Lansdon EB, Fisher AJ, Segel IH. Human 3'-phosphoadenosine 5'-phosphosulfate synthetase (isoform 1, brain): kinetic properties of the adenosine triphosphate sulfurylase and adenosine 5'-phosphosulfate kinase domains. Biochemistry. 43: 4356-65. PMID 15065880 DOI: 10.1021/Bi049827M  0.733
2004 Forsyth CM, Lemongello D, LaCount DJ, Friesen PD, Fisher AJ. Crystal structure of an invertebrate caspase. The Journal of Biological Chemistry. 279: 7001-8. PMID 14645217 DOI: 10.1074/Jbc.M312472200  0.409
2004 Hanna E, Ng KF, MacRae IJ, Bley CJ, Fisher AJ, Segel IH. Kinetic and stability properties of Penicillium chrysogenum ATP sulfurylase missing the C-terminal regulatory domain. The Journal of Biological Chemistry. 279: 4415-24. PMID 14613928 DOI: 10.1074/Jbc.M311317200  0.693
2002 Lansdon EB, Segel IH, Fisher AJ. Ligand-induced structural changes in adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum. Biochemistry. 41: 13672-80. PMID 12427029 DOI: 10.1021/Bi026556B  0.787
2002 MacRae IJ, Segel IH, Fisher AJ. Allosteric inhibition via R-state destabilization in ATP sulfurylase from Penicillium chrysogenum. Nature Structural Biology. 9: 945-9. PMID 12426581 DOI: 10.1038/Nsb868  0.709
2002 Hanna E, MacRae IJ, Medina DC, Fisher AJ, Segel IH. ATP sulfurylase from the hyperthermophilic chemolithotroph Aquifex aeolicus. Archives of Biochemistry and Biophysics. 406: 275-88. PMID 12361716 DOI: 10.1016/S0003-9861(02)00428-9  0.688
2002 Eddins MJ, Lemongello D, Friesen PD, Fisher AJ. Crystallization and low-resolution structure of an effector-caspase/P35 complex: similarities and differences to an initiator-caspase/P35 complex. Acta Crystallographica. Section D, Biological Crystallography. 58: 299-302. PMID 11807256 DOI: 10.1107/S0907444901018753  0.741
2002 Lansdon EB, Segel IH, Fisher AJ. Diagnosing the structural mechanism of APS kinase Acta Crystallographica Section a Foundations of Crystallography. 58: c105-c105. DOI: 10.1107/S0108767302089213  0.726
2002 Fisher AJ, MacRae IJ, Lansdon EB, Beynon JD, Segel IH. Evolving an enzyme into different metabolic roles: structures of fungal and bacterial ATP sulfurylase Acta Crystallographica Section a Foundations of Crystallography. 58: c99-c99. DOI: 10.1107/S0108767302089006  0.768
2001 Beynon JD, MacRae IJ, Huston SL, Nelson DC, Segel IH, Fisher AJ. Crystal structure of ATP sulfurylase from the bacterial symbiont of the hydrothermal vent tubeworm Riftia pachyptila. Biochemistry. 40: 14509-17. PMID 11724564 DOI: 10.1021/Bi015643L  0.824
2001 Medina DC, Hanna E, MacRae IJ, Fisher AJ, Segel IH. Temperature effects on the allosteric transition of ATP sulfurylase from Penicillium chrysogenum. Archives of Biochemistry and Biophysics. 393: 51-60. PMID 11516160 DOI: 10.1006/Abbi.2001.2490  0.642
2001 dela Cruz WP, Friesen PD, Fisher AJ. Crystal structure of baculovirus P35 reveals a novel conformational change in the reactive site loop after caspase cleavage. The Journal of Biological Chemistry. 276: 32933-9. PMID 11402050 DOI: 10.1074/Jbc.M103930200  0.782
2001 MacRae IJ, Segel IH, Fisher AJ. Crystal structure of ATP sulfurylase from Penicillium chrysogenum: insights into the allosteric regulation of sulfate assimilation. Biochemistry. 40: 6795-804. PMID 11389593 DOI: 10.1021/Bi010367W  0.729
2000 Beynon J, Rafanan ER, Shen B, Fisher AJ. Crystallization and preliminary X-ray analysis of tetracenomycin A2 oxygenase: a flavoprotein hydroxylase involved in polyketide biosynthesis. Acta Crystallographica. Section D, Biological Crystallography. 56: 1647-51. PMID 11092935 DOI: 10.1107/S0907444900012695  0.744
2000 MacRae IJ, Hanna E, Ho JD, Fisher AJ, Segel IH. Induction of positive cooperativity by amino acid replacements within the C-terminal domain of Penicillium chrysogenum ATP sulfurylase. The Journal of Biological Chemistry. 275: 36303-10. PMID 10956658 DOI: 10.1042/Bst028A320  0.695
2000 MacRae IJ, Segel IH, Fisher AJ. Crystal structure of adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum. Biochemistry. 39: 1613-21. PMID 10677210 DOI: 10.1021/Bi9924157  0.728
1999 Fisher AJ, Cruz Wd, Zoog SJ, Schneider CL, Friesen PD. Crystal structure of baculovirus P35: role of a novel reactive site loop in apoptotic caspase inhibition. The Embo Journal. 18: 2031-9. PMID 10205157 DOI: 10.1093/Emboj/18.8.2031  0.378
1998 Rao-Naik C, delaCruz W, Laplaza JM, Tan S, Callis J, Fisher AJ. The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis. The Journal of Biological Chemistry. 273: 34976-82. PMID 9857029 DOI: 10.1074/Jbc.273.52.34976  0.41
1997 Thoden JB, Holden HM, Fisher AJ, Sinclair JF, Wesenberg G, Baldwin TO, Rayment I. Structure of the beta 2 homodimer of bacterial luciferase from Vibrio harveyi: X-ray analysis of a kinetic protein folding trap. Protein Science : a Publication of the Protein Society. 6: 13-23. PMID 9007973 DOI: 10.1002/Pro.5560060103  0.565
1996 Fisher AJ, Thompson TB, Thoden JB, Baldwin TO, Rayment I. The 1.5-A resolution crystal structure of bacterial luciferase in low salt conditions. The Journal of Biological Chemistry. 271: 21956-68. PMID 8703001 DOI: 10.1074/Jbc.271.36.21956  0.752
1996 Rayment I, Fisher AJ, Smith CA, Gulick A, Smith R, Holden HM, Sutoh K. Structural basis of myosin motility Acta Crystallographica Section a Foundations of Crystallography. 52: C209-C209. DOI: 10.1107/S010876739609099X  0.771
1995 Baldwin TO, Christopher JA, Raushel FM, Sinclair JF, Ziegler MM, Fisher AJ, Rayment I. Structure of bacterial luciferase. Current Opinion in Structural Biology. 5: 798-809. PMID 8749369 DOI: 10.1016/0959-440X(95)80014-X  0.606
1995 Fisher AJ, Smith CA, Thoden J, Smith R, Sutoh K, Holden HM, Rayment I. Structural studies of myosin:nucleotide complexes: a revised model for the molecular basis of muscle contraction. Biophysical Journal. 68: 19S-26S; discussion . PMID 7787065  0.575
1995 Fisher AJ, Raushel FM, Baldwin TO, Rayment I. Three-dimensional structure of bacterial luciferase from Vibrio harveyi at 2.4 A resolution. Biochemistry. 34: 6581-6. PMID 7756289 DOI: 10.1021/Bi00020A002  0.637
1995 Fisher AJ, Smith CA, Thoden JB, Smith R, Sutoh K, Holden HM, Rayment I. X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-. Biochemistry. 34: 8960-72. PMID 7619795 DOI: 10.1021/Bi00028A004  0.732
1994 McKinney BR, Agrawal D, Fisher AJ, Johnson JE, Schneemann A, Rueckert RR. Production and crystallization of virus-like particles assembled in a heterologous protein expression system. Acta Crystallographica. Section D, Biological Crystallography. 50: 351-4. PMID 15299383 DOI: 10.1107/S090744499400123X  0.393
1994 Cheng RH, Reddy VS, Olson NH, Fisher AJ, Baker TS, Johnson JE. Functional implications of quasi-equivalence in a T = 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography. Structure (London, England : 1993). 2: 271-82. PMID 8087554 DOI: 10.1016/S0969-2126(00)00029-0  0.483
1994 Johnson JE, Munshi S, Liljas L, Agrawal D, Olson NH, Reddy V, Fisher A, McKinney B, Schmidt T, Baker TS. Comparative studies of T = 3 and T = 4 icosahedral RNA insect viruses Archives of Virology. Supplementum. 9: 497-512. PMID 8032278 DOI: 10.1007/978-3-7091-9326-6_48  0.462
1993 Fisher AJ, McKinney BR, Schneemann A, Rueckert RR, Johnson JE. Crystallization of viruslike particles assembled from flock house virus coat protein expressed in a baculovirus system. Journal of Virology. 67: 2950-3. PMID 8474184 DOI: 10.1128/Jvi.67.5.2950-2953.1993  0.51
1993 Fisher AJ, Johnson JE. Ordered duplex RNA controls capsid architecture in an icosahedral animal virus. Nature. 361: 176-9. PMID 8421524 DOI: 10.1038/361176A0  0.513
1992 Fisher AJ, McKinney BR, Wery JP, Johnson JE. Crystallization and preliminary data analysis of Flock House virus. Acta Crystallographica. Section B, Structural Science. 48: 515-20. PMID 1418822 DOI: 10.1107/S0108768192000053  0.494
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