Brent Doiron - Publications

Affiliations: 
Mathematics University of Pittsburgh, Pittsburgh, PA, United States 
Area:
mathematical neuroscience, sensory systems
Website:
http://www.math.pitt.edu/~bdoiron

76 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Ni AM, Huang C, Doiron B, Cohen MR. A general decoding strategy explains the relationship between behavior and correlated variability. Elife. 11. PMID 35660134 DOI: 10.7554/eLife.67258  0.787
2022 Huang C, Pouget A, Doiron B. Internally generated population activity in cortical networks hinders information transmission. Science Advances. 8: eabg5244. PMID 35648863 DOI: 10.1126/sciadv.abg5244  0.828
2021 Aponte DA, Handy G, Kline AM, Tsukano H, Doiron B, Kato HK. Recurrent network dynamics shape direction selectivity in primary auditory cortex. Nature Communications. 12: 314. PMID 33436635 DOI: 10.1038/s41467-020-20590-6  0.325
2020 Richards BA, Doiron B. Decision letter: Population coupling predicts the plasticity of stimulus responses in cortical circuits Elife. DOI: 10.7554/Elife.56053.Sa1  0.325
2019 Linaro D, Ocker GK, Doiron B, Giugliano M. Correlation transfer by layer 5 cortical neurons under recreated synaptic inputs . The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 31346031 DOI: 10.1523/JNEUROSCI.3169-18.2019  0.577
2019 Williamson RC, Doiron B, Smith MA, Yu BM. Bridging large-scale neuronal recordings and large-scale network models using dimensionality reduction. Current Opinion in Neurobiology. 55: 40-47. PMID 30677702 DOI: 10.1016/J.Conb.2018.12.009  0.787
2018 Kass RE, Amari SI, Arai K, Brown EN, Diekman CO, Diesmann M, Doiron B, Eden UT, Fairhall AL, Fiddyment GM, Fukai T, Grün S, Harrison MT, Helias M, Nakahara H, et al. Computational Neuroscience: Mathematical and Statistical Perspectives. Annual Review of Statistics and Its Application. 5: 183-214. PMID 30976604 DOI: 10.1146/annurev-statistics-041715-033733  0.741
2018 Huang C, Ruff DA, Pyle R, Rosenbaum R, Cohen MR, Doiron B. Circuit Models of Low-Dimensional Shared Variability in Cortical Networks. Neuron. PMID 30581012 DOI: 10.1016/J.Neuron.2018.11.034  0.824
2018 Ocker GK, Doiron B. Training and Spontaneous Reinforcement of Neuronal Assemblies by Spike Timing Plasticity. Cerebral Cortex (New York, N.Y. : 1991). PMID 29415191 DOI: 10.1093/cercor/bhy001  0.585
2017 Ocker GK, Hu Y, Buice MA, Doiron B, Josić K, Rosenbaum R, Shea-Brown E. From the statistics of connectivity to the statistics of spike times in neuronal networks. Current Opinion in Neurobiology. 46: 109-119. PMID 28863386 DOI: 10.1016/J.Conb.2017.07.011  0.727
2017 Bittner SR, Williamson RC, Snyder AC, Litwin-Kumar A, Doiron B, Chase SM, Smith MA, Yu BM. Population activity structure of excitatory and inhibitory neurons. Plos One. 12: e0181773. PMID 28817581 DOI: 10.1371/Journal.Pone.0181773  0.775
2017 Huang C, Doiron B. Once upon a (slow) time in the land of recurrent neuronal networks…. Current Opinion in Neurobiology. 46: 31-38. PMID 28756341 DOI: 10.1016/J.Conb.2017.07.003  0.792
2017 Kanashiro T, Ocker GK, Cohen MR, Doiron B. Attentional modulation of neuronal variability in circuit models of cortex. Elife. 6. PMID 28590902 DOI: 10.7554/eLife.23978  0.552
2017 Ly C, Doiron B. Noise-enhanced coding in phasic neuron spike trains. Plos One. 12: e0176963. PMID 28472143 DOI: 10.1371/Journal.Pone.0176963  0.782
2017 Kanashiro T, Ocker GK, Cohen MR, Doiron B. Author response: Attentional modulation of neuronal variability in circuit models of cortex Elife. DOI: 10.7554/Elife.23978.019  0.43
2016 Williamson RC, Cowley BR, Litwin-Kumar A, Doiron B, Kohn A, Smith MA, Yu BM. Scaling Properties of Dimensionality Reduction for Neural Populations and Network Models. Plos Computational Biology. 12: e1005141. PMID 27926936 DOI: 10.1371/Journal.Pcbi.1005141  0.777
2016 Rosenbaum R, Smith MA, Kohn A, Rubin JE, Doiron B. The spatial structure of correlated neuronal variability. Nature Neuroscience. PMID 27798630 DOI: 10.1038/Nn.4433  0.703
2016 Doiron B, Litwin-Kumar A, Rosenbaum R, Ocker GK, Josić K. The mechanics of state-dependent neural correlations. Nature Neuroscience. 19: 383-93. PMID 26906505 DOI: 10.1038/nn.4242  0.549
2016 Litwin-Kumar A, Rosenbaum R, Doiron B. Inhibitory stabilization and visual coding in cortical circuits with multiple interneuron subtypes. Journal of Neurophysiology. jn.00732.2015. PMID 26740531 DOI: 10.1152/jn.00732.2015  0.489
2015 Ocker GK, Litwin-Kumar A, Doiron B. Self-Organization of Microcircuits in Networks of Spiking Neurons with Plastic Synapses. Plos Computational Biology. 11: e1004458. PMID 26291697 DOI: 10.1371/journal.pcbi.1004458  0.48
2014 Litwin-Kumar A, Doiron B. Formation and maintenance of neuronal assemblies through synaptic plasticity. Nature Communications. 5: 5319. PMID 25395015 DOI: 10.1038/ncomms6319  0.512
2014 Doiron B, Litwin-Kumar A. Balanced neural architecture and the idling brain. Frontiers in Computational Neuroscience. 8: 56. PMID 24904394 DOI: 10.3389/fncom.2014.00056  0.495
2014 Ocker GK, Doiron B. Kv7 channels regulate pairwise spiking covariability in health and disease. Journal of Neurophysiology. 112: 340-52. PMID 24790164 DOI: 10.1152/jn.00084.2014  0.512
2014 Rosenbaum R, Zimnik A, Zheng F, Turner RS, Alzheimer C, Doiron B, Rubin JE. Axonal and synaptic failure suppress the transfer of firing rate oscillations, synchrony and information during high frequency deep brain stimulation. Neurobiology of Disease. 62: 86-99. PMID 24051279 DOI: 10.1016/J.Nbd.2013.09.006  0.437
2014 Rosenbaum R, Doiron B. Balanced networks of spiking neurons with spatially dependent recurrent connections Physical Review X. 4. DOI: 10.1103/PhysRevX.4.021039  0.509
2013 Kilpatrick ZP, Ermentrout B, Doiron B. Optimizing working memory with heterogeneity of recurrent cortical excitation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 18999-9011. PMID 24285904 DOI: 10.1523/Jneurosci.1641-13.2013  0.422
2013 Rosenbaum R, Rubin JE, Doiron B. Short-term synaptic depression and stochastic vesicle dynamics reduce and shape neuronal correlations. Journal of Neurophysiology. 109: 475-84. PMID 23114215 DOI: 10.1152/Jn.00733.2012  0.451
2012 Litwin-Kumar A, Chacron MJ, Doiron B. The spatial structure of stimuli shapes the timescale of correlations in population spiking activity. Plos Computational Biology. 8: e1002667. PMID 23028274 DOI: 10.1371/Journal.Pcbi.1002667  0.71
2012 Litwin-Kumar A, Doiron B. Slow dynamics and high variability in balanced cortical networks with clustered connections. Nature Neuroscience. 15: 1498-505. PMID 23001062 DOI: 10.1038/nn.3220  0.499
2012 Rosenbaum R, Rubin J, Doiron B. Short term synaptic depression imposes a frequency dependent filter on synaptic information transfer. Plos Computational Biology. 8: e1002557. PMID 22737062 DOI: 10.1371/Journal.Pcbi.1002557  0.344
2012 Polk A, Litwin-Kumar A, Doiron B. Correlated neural variability in persistent state networks. Proceedings of the National Academy of Sciences of the United States of America. 109: 6295-300. PMID 22474377 DOI: 10.1073/pnas.1121274109  0.515
2012 Ly C, Middleton JW, Doiron B. Cellular and circuit mechanisms maintain low spike co-variability and enhance population coding in somatosensory cortex. Frontiers in Computational Neuroscience. 6: 7. PMID 22408615 DOI: 10.3389/Fncom.2012.00007  0.813
2012 Leao RM, Li S, Doiron B, Tzounopoulos T. Diverse levels of an inwardly rectifying potassium conductance generate heterogeneous neuronal behavior in a population of dorsal cochlear nucleus pyramidal neurons. Journal of Neurophysiology. 107: 3008-19. PMID 22378165 DOI: 10.1152/jn.00660.2011  0.462
2012 Middleton JW, Omar C, Doiron B, Simons DJ. Neural correlation is stimulus modulated by feedforward inhibitory circuitry. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 506-18. PMID 22238086 DOI: 10.1523/Jneurosci.3474-11.2012  0.752
2012 Koch Ocker G, Tzounopoulos T, Doiron B. Adaptation shapes spike train correlations: theory and application to tinnitus Bmc Neuroscience. 13: P146. DOI: 10.1186/1471-2202-13-S1-P146  0.49
2012 Rosenbaum R, Rubin J, Doiron B. Short term synaptic depression with stochastic vesicle dynamics imposes a high-pass filter on presynaptic information Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-O17  0.346
2011 Reitsma P, Doiron B, Rubin J. Correlation transfer from basal ganglia to thalamus in Parkinson's disease. Frontiers in Computational Neuroscience. 5: 58. PMID 22355287 DOI: 10.3389/fncom.2011.00058  0.545
2011 Litwin-Kumar A, Oswald AM, Urban NN, Doiron B. Balanced synaptic input shapes the correlation between neural spike trains. Plos Computational Biology. 7: e1002305. PMID 22215995 DOI: 10.1371/Journal.Pcbi.1002305  0.807
2011 Doiron B, Zhao Y, Tzounopoulos T. Combined LTP and LTD of modulatory inputs controls neuronal processing of primary sensory inputs. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 10579-92. PMID 21775602 DOI: 10.1523/JNEUROSCI.1592-11.2011  0.465
2011 Giridhar S, Doiron B, Urban NN. Timescale-dependent shaping of correlation by olfactory bulb lateral inhibition. Proceedings of the National Academy of Sciences of the United States of America. 108: 5843-8. PMID 21436050 DOI: 10.1073/Pnas.1015165108  0.546
2010 Gai Y, Doiron B, Rinzel J. Slope-based stochastic resonance: how noise enables phasic neurons to encode slow signals. Plos Computational Biology. 6: e1000825. PMID 20585612 DOI: 10.1371/Journal.Pcbi.1000825  0.738
2010 Doiron B. The Role of Variability in Populations of Spiking Neurons Stochastic Methods in Neuroscience. DOI: 10.1093/acprof:oso/9780199235070.003.0006  0.366
2009 Gai Y, Doiron B, Kotak V, Rinzel J. Noise-gated encoding of slow inputs by auditory brain stem neurons with a low-threshold K+ current. Journal of Neurophysiology. 102: 3447-60. PMID 19812289 DOI: 10.1152/Jn.00538.2009  0.747
2009 Oswald AM, Doiron B, Rinzel J, Reyes AD. Spatial profile and differential recruitment of GABAB modulate oscillatory activity in auditory cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 10321-34. PMID 19692606 DOI: 10.1523/JNEUROSCI.1703-09.2009  0.804
2009 Josić K, Shea-Brown E, Doiron B, de la Rocha J. Stimulus-dependent correlations and population codes. Neural Computation. 21: 2774-804. PMID 19635014 DOI: 10.1162/Neco.2009.10-08-879  0.783
2009 Ly C, Doiron B. Divisive gain modulation with dynamic stimuli in integrate-and-fire neurons. Plos Computational Biology. 5: e1000365. PMID 19390603 DOI: 10.1371/Journal.Pcbi.1000365  0.772
2009 Sutherland C, Doiron B, Longtin A. Feedback-induced gain control in stochastic spiking networks. Biological Cybernetics. 100: 475-89. PMID 19259695 DOI: 10.1007/S00422-009-0298-5  0.609
2009 Ly C, Doiron B. Correction: Divisive Gain Modulation with Dynamic Stimuli in Integrate-and-Fire Neurons Plos Computational Biology. 5. DOI: 10.1371/Annotation/9C4474F6-E58E-41Ea-Af4B-090Bbb86F474  0.716
2008 Mehaffey WH, Fernandez FR, Doiron B, Turner RW. Regulation of somatic firing dynamics by backpropagating dendritic spikes. Journal of Physiology, Paris. 102: 181-94. PMID 18984047 DOI: 10.1016/j.jphysparis.2008.10.011  0.669
2008 Shea-Brown E, Josić K, de la Rocha J, Doiron B. Correlation and synchrony transfer in integrate-and-fire neurons: basic properties and consequences for coding. Physical Review Letters. 100: 108102. PMID 18352234 DOI: 10.1103/Physrevlett.100.108102  0.806
2008 Day ML, Doiron B, Rinzel J. Subthreshold K+ channel dynamics interact with stimulus spectrum to influence temporal coding in an auditory brain stem model. Journal of Neurophysiology. 99: 534-44. PMID 18057115 DOI: 10.1152/Jn.00326.2007  0.803
2008 Masuda N, Doiron B. Signal discrimination performed by population of spiking neurons enhanced by a background gamma oscillations Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-P138  0.47
2007 Masuda N, Doiron B. Gamma oscillations of spiking neural populations enhance signal discrimination. Plos Computational Biology. 3: e236. PMID 18052541 DOI: 10.1371/journal.pcbi.0030236  0.382
2007 de la Rocha J, Doiron B, Shea-Brown E, Josić K, Reyes A. Correlation between neural spike trains increases with firing rate. Nature. 448: 802-6. PMID 17700699 DOI: 10.1038/Nature06028  0.806
2007 Doiron B, Oswald AM, Maler L. Interval coding. II. Dendrite-dependent mechanisms. Journal of Neurophysiology. 97: 2744-57. PMID 17409177 DOI: 10.1152/Jn.00988.2006  0.807
2007 Oswald AM, Doiron B, Maler L. Interval coding. I. Burst interspike intervals as indicators of stimulus intensity. Journal of Neurophysiology. 97: 2731-43. PMID 17409176 DOI: 10.1152/Jn.00987.2006  0.811
2006 Coombes S, Doiron B, Josić K, Shea-Brown E. Towards blueprints for network architecture, biophysical dynamics and signal transduction. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 364: 3301-18. PMID 17090461 DOI: 10.1098/Rsta.2006.1903  0.681
2006 Doiron B, Rinzel J, Reyes A. Stochastic synchronization in finite size spiking networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 030903. PMID 17025585 DOI: 10.1103/PhysRevE.74.030903  0.811
2005 Lindner B, Doiron B, Longtin A. Theory of oscillatory firing induced by spatially correlated noise and delayed inhibitory feedback. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 061919. PMID 16485986 DOI: 10.1103/Physreve.72.061919  0.748
2005 Mehaffey WH, Doiron B, Maler L, Turner RW. Deterministic multiplicative gain control with active dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 9968-77. PMID 16251445 DOI: 10.1523/JNEUROSCI.2682-05.2005  0.745
2005 Masuda N, Doiron B, Longtin A, Aihara K. Coding of temporally varying signals in networks of spiking neurons with global delayed feedback. Neural Computation. 17: 2139-75. PMID 16105221 DOI: 10.1162/0899766054615680  0.699
2004 Doiron B, Lindner B, Longtin A, Maler L, Bastian J. Oscillatory activity in electrosensory neurons increases with the spatial correlation of the stochastic input stimulus. Physical Review Letters. 93: 048101. PMID 15323795 DOI: 10.1103/Physrevlett.93.048101  0.803
2004 Oswald AM, Chacron MJ, Doiron B, Bastian J, Maler L. Parallel processing of sensory input by bursts and isolated spikes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 24: 4351-62. PMID 15128849 DOI: 10.1523/Jneurosci.0459-04.2004  0.823
2003 Laing CR, Doiron B, Longtin A, Noonan L, Turner RW, Maler L. Type I burst excitability. Journal of Computational Neuroscience. 14: 329-42. PMID 12766431 DOI: 10.1023/A:1023269128622  0.759
2003 Chacron MJ, Doiron B, Maler L, Longtin A, Bastian J. Non-classical receptive field mediates switch in a sensory neuron's frequency tuning. Nature. 423: 77-81. PMID 12721628 DOI: 10.1038/Nature01590  0.79
2003 Noonan L, Doiron B, Laing C, Longtin A, Turner RW. A dynamic dendritic refractory period regulates burst discharge in the electrosensory lobe of weakly electric fish. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 1524-34. PMID 12598641 DOI: 10.1523/Jneurosci.23-04-01524.2003  0.742
2003 Doiron B, Chacron MJ, Maler L, Longtin A, Bastian J. Inhibitory feedback required for network oscillatory responses to communication but not prey stimuli. Nature. 421: 539-43. PMID 12556894 DOI: 10.1038/Nature01360  0.803
2003 Doiron B, Noonan L, Lemon N, Turner RW. Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. Journal of Neurophysiology. 89: 324-37. PMID 12522183 DOI: 10.1152/jn.00729.2002  0.676
2003 Doiron B, Longtin A, Lindner B. Oscillatory network coding of a global stimulus Proceedings of Spie - the International Society For Optical Engineering. 5110: 201-209. DOI: 10.1117/12.497143  0.686
2003 Chacron MJ, Doiron B, Maler L, Longtin A, Bastian J. Erratum: corrigendum: Non-classical receptive field mediates switch in a sensory neuron's frequency tuning Nature. 423: 1018-1018. DOI: 10.1038/Nature01684  0.751
2002 Turner RW, Lemon N, Doiron B, Rashid AJ, Morales E, Longtin A, Maler L, Dunn RJ. Oscillatory burst discharge generated through conditional backpropagation of dendritic spikes. Journal of Physiology, Paris. 96: 517-30. PMID 14692499 DOI: 10.1016/S0928-4257(03)00007-X  0.773
2002 Longtin A, Doiron B, Bulsara AR. Noise-induced divisive gain control in neuron models. Bio Systems. 67: 147-56. PMID 12459294 DOI: 10.1016/S0303-2647(02)00073-4  0.623
2002 Doiron B, Laing C, Longtin A, Maler L. Ghostbursting: a novel neuronal burst mechanism. Journal of Computational Neuroscience. 12: 5-25. PMID 11932557 DOI: 10.1023/A:1014921628797  0.728
2002 Laing CR, Doiron B, Longtin A, Maler L. Ghostbursting: The effects of dendrites on spike patterns Neurocomputing. 44: 127-132. DOI: 10.1016/S0925-2312(02)00373-9  0.688
2001 Doiron B, Longtin A, Turner RW, Maler L. Model of gamma frequency burst discharge generated by conditional backpropagation. Journal of Neurophysiology. 86: 1523-45. PMID 11600618 DOI: 10.1152/Jn.2001.86.4.1523  0.784
2001 Doiron B, Longtin A, Berman N, Maler L. Subtractive and divisive inhibition: effect of voltage-dependent inhibitory conductances and noise. Neural Computation. 13: 227-48. PMID 11177434 DOI: 10.1162/089976601300014691  0.663
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