Steven Hallam - Publications

Affiliations: 
University of British Columbia, Vancouver, Vancouver, BC, Canada 

56/281 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 McDaniel EA, Scarborough M, Mulat DG, Lin X, Sampara PS, Olson HM, Young RP, Eder EK, Attah IK, Markillie LM, Hoyt DW, Lipton MS, Hallam SJ, Ziels RM. Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium. The Isme Journal. PMID 37880541 DOI: 10.1038/s41396-023-01542-6  0.326
2023 Kieft B, Finke N, McLaughlin RJ, Nallan AN, Krzywinski M, Crowe SA, Hallam SJ. Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater. Nature Communications. 14: 5380. PMID 37666802 DOI: 10.1038/s41467-023-40907-5  0.324
2023 Anstett J, Plominsky AM, DeLong EF, Kiesser A, Jürgens K, Morgan-Lang C, Stepanauskas R, Stewart FJ, Ulloa O, Woyke T, Malmstrom R, Hallam SJ. A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters. Scientific Data. 10: 332. PMID 37244914 DOI: 10.1038/s41597-023-02222-y  0.695
2023 Qiu Y, Noonan AJC, Dofher K, Koch M, Kieft B, Lin X, Ziels RM, Hallam SJ. Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment. Microbiology Resource Announcements. 12: e0075922. PMID 36625650 DOI: 10.1128/mra.00759-22  0.357
2022 Noonan AJC, Qiu Y, Kieft B, Formby S, Liu T, Dofher K, Koch M, Hallam SJ. Metagenome-Assembled Genomes for " Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment. Microbiology Resource Announcements. e0044722. PMID 36409107 DOI: 10.1128/mra.00447-22  0.306
2022 Ou YF, Dong HP, McIlroy SJ, Crowe SA, Hallam SJ, Han P, Kallmeyer J, Simister RL, Vuillemin A, Leu AO, Liu Z, Zheng YL, Sun QL, Liu M, Tyson GW, et al. Expanding the phylogenetic distribution of cytochrome b-containing methanogenic archaea sheds light on the evolution of methanogenesis. The Isme Journal. PMID 35810262 DOI: 10.1038/s41396-022-01281-0  0.752
2022 Chadwick GL, Skennerton CT, Laso-Pérez R, Leu AO, Speth DR, Yu H, Morgan-Lang C, Hatzenpichler R, Goudeau D, Malmstrom R, Brazelton WJ, Woyke T, Hallam SJ, Tyson GW, Wegener G, et al. Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea. Plos Biology. 20: e3001508. PMID 34986141 DOI: 10.1371/journal.pbio.3001508  0.777
2021 Basher ARMA, Mclaughlin RJ, Hallam SJ. Metabolic Pathway Prediction Using Non-Negative Matrix Factorization with Improved Precision. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 34520674 DOI: 10.1089/cmb.2021.0258  0.34
2021 Roux S, Paul BG, Bagby SC, Nayfach S, Allen MA, Attwood G, Cavicchioli R, Chistoserdova L, Gruninger RJ, Hallam SJ, Hernandez ME, Hess M, Liu WT, McAllister TA, O'Malley MA, et al. Ecology and molecular targets of hypermutation in the global microbiome. Nature Communications. 12: 3076. PMID 34031405 DOI: 10.1038/s41467-021-23402-7  0.682
2020 M A Basher AR, McLaughlin RJ, Hallam SJ. Metabolic pathway inference using multi-label classification with rich pathway features. Plos Computational Biology. 16: e1008174. PMID 33001968 DOI: 10.1371/journal.pcbi.1008174  0.341
2020 Morgan-Lang C, McLaughlin R, Armstrong Z, Zhang G, Chan K, Hallam SJ. TreeSAPP: The Tree-based Sensitive and Accurate Phylogenetic Profiler. Bioinformatics (Oxford, England). PMID 32637989 DOI: 10.1093/Bioinformatics/Btaa588  0.359
2019 Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, ... Hallam SJ, et al. Consent insufficient for data release-Response. Science (New York, N.Y.). 364: 446. PMID 31048484 DOI: 10.1126/Science.Aax7509  0.614
2019 Borrel G, Adam PS, McKay LJ, Chen LX, Sierra-García IN, Sieber CMK, Letourneur Q, Ghozlane A, Andersen GL, Li WJ, Hallam SJ, Muyzer G, de Oliveira VM, Inskeep WP, Banfield JF, et al. Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea. Nature Microbiology. PMID 30833729 DOI: 10.1038/S41564-019-0363-3  0.374
2019 Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, ... Hallam SJ, et al. Toward unrestricted use of public genomic data. Science (New York, N.Y.). 363: 350-352. PMID 30679363 DOI: 10.1126/Science.Aaw1280  0.618
2018 Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Hallam SJ, et al. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 36: 660. PMID 29979671 DOI: 10.1038/Nbt0718-660A  0.662
2018 Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Hallam SJ, et al. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 36: 196. PMID 29406516 DOI: 10.1038/Nbt0218-196A  0.695
2018 Holert J, Cardenas E, Bergstrand LH, Zaikova E, Hahn AS, Hallam SJ, Mohn WW. Metagenomes Reveal Global Distribution of Bacterial Steroid Catabolism in Natural, Engineered, and Host Environments. Mbio. 9. PMID 29382738 DOI: 10.1128/Mbio.02345-17  0.303
2017 Pachiadaki MG, Sintes E, Bergauer K, Brown JM, Record NR, Swan BK, Mathyer ME, Hallam SJ, Lopez-Garcia P, Takaki Y, Nunoura T, Woyke T, Herndl GJ, Stepanauskas R. Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation. Science (New York, N.Y.). 358: 1046-1051. PMID 29170234 DOI: 10.1126/science.aan8260  0.327
2017 Hawley AK, Nobu MK, Wright JJ, Durno WE, Morgan-Lang C, Sage B, Schwientek P, Swan BK, Rinke C, Torres-Beltrán M, Mewis K, Liu WT, Stepanauskas R, Woyke T, Hallam SJ. Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients. Nature Communications. 8: 1507. PMID 29142241 DOI: 10.1038/S41467-017-01376-9  0.302
2017 Strassert JFH, Karnkowska A, Hehenberger E, Del Campo J, Kolisko M, Okamoto N, Burki F, Janouškovec J, Poirier C, Leonard G, Hallam SJ, Richards TA, Worden AZ, Santoro AE, Keeling PJ. Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates. The Isme Journal. PMID 28994824 DOI: 10.1038/Ismej.2017.167  0.392
2017 Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Hallam SJ, et al. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 35: 725-731. PMID 28787424 DOI: 10.1038/Nbt.3893  0.711
2017 Collingro A, Köstlbacher S, Mussmann M, Stepanauskas R, Hallam SJ, Horn M. Unexpected genomic features in widespread intracellular bacteria: evidence for motility of marine chlamydiae. The Isme Journal. PMID 28644443 DOI: 10.1038/ismej.2017.95  0.371
2017 Hahn AS, Altman T, Konwar KM, Hanson NW, Kim D, Relman DA, Dill DL, Hallam SJ. A geographically-diverse collection of 418 human gut microbiome pathway genome databases. Scientific Data. 4: 170035. PMID 28398290 DOI: 10.1038/Sdata.2017.35  0.307
2017 Crowe SA, Hahn AS, Morgan-Lang C, Thompson KJ, Simister RL, Llirós M, Hirst M, Hallam SJ. Draft Genome Sequence of the Pelagic Photoferrotroph Chlorobium phaeoferrooxidans. Genome Announcements. 5. PMID 28360175 DOI: 10.1128/genomeA.01584-16  0.372
2016 Louca S, Hawley AK, Katsev S, Torres-Beltran M, Bhatia MP, Kheirandish S, Michiels CC, Capelle D, Lavik G, Doebeli M, Crowe SA, Hallam SJ. Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone. Proceedings of the National Academy of Sciences of the United States of America. PMID 27655888 DOI: 10.1073/Pnas.1602897113  0.322
2016 Hanson NW, Konwar KM, Hallam SJ. LCA*: an entropy-based measure for taxonomic assignment within assembled metagenomes. Bioinformatics (Oxford, England). PMID 27515739 DOI: 10.1093/bioinformatics/btw400  0.329
2016 Singer E, Bushnell B, Coleman-Derr D, Bowman B, Bowers RM, Levy A, Gies EA, Cheng JF, Copeland A, Klenk HP, Hallam SJ, Hugenholtz P, Tringe SG, Woyke T. High-resolution phylogenetic microbial community profiling. The Isme Journal. PMID 26859772 DOI: 10.1038/Ismej.2015.249  0.319
2015 Lawson CE, Strachan CR, Williams DD, Koziel S, Hallam SJ, Budwill K. Patterns of Endemism and Habitat Selection in Coalbed Microbial Communities. Applied and Environmental Microbiology. 81: 7924-37. PMID 26341214 DOI: 10.1128/AEM.01737-15  0.377
2015 Roux S, Hallam SJ, Woyke T, Sullivan MB. Viral dark matter and virus-host interactions resolved from publicly available microbial genomes. Elife. 4. PMID 26200428 DOI: 10.7554/eLife.08490  0.343
2015 Nobu MK, Dodsworth JA, Murugapiran SK, Rinke C, Gies EA, Webster G, Schwientek P, Kille P, Parkes RJ, Sass H, Jørgensen BB, Weightman AJ, Liu WT, Hallam SJ, Tsiamis G, et al. Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics. The Isme Journal. PMID 26090992 DOI: 10.1038/Ismej.2015.97  0.435
2015 Youssef NH, Farag IF, Rinke C, Hallam SJ, Woyke T, Elshahed MS. In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3). Plos One. 10: e0127499. PMID 26039074 DOI: 10.1371/Journal.Pone.0127499  0.337
2015 Chow CE, Winget DM, White RA, Hallam SJ, Suttle CA. Combining genomic sequencing methods to explore viral diversity and reveal potential virus-host interactions. Frontiers in Microbiology. 6: 265. PMID 25914678 DOI: 10.3389/Fmicb.2015.00265  0.37
2015 Labonté JM, Swan BK, Poulos B, Luo H, Koren S, Hallam SJ, Sullivan MB, Woyke T, Eric Wommack K, Stepanauskas R. Single-cell genomics-based analysis of virus-host interactions in marine surface bacterioplankton. The Isme Journal. PMID 25848873 DOI: 10.1038/Ismej.2015.48  0.325
2015 Baldwin SA, Khoshnoodi M, Rezadehbashi M, Taupp M, Hallam S, Mattes A, Sanei H. The microbial community of a passive biochemical reactor treating arsenic, zinc, and sulfate-rich seepage. Frontiers in Bioengineering and Biotechnology. 3: 27. PMID 25798439 DOI: 10.3389/Fbioe.2015.00027  0.373
2015 Roux S, Hallam SJ, Woyke T, Sullivan MB. Viral dark matter and virus–host interactions resolved from publicly available microbial genomes Elife. 4. DOI: 10.7554/eLife.08490.001  0.331
2014 Gies EA, Konwar KM, Beatty JT, Hallam SJ. Illuminating microbial dark matter in meromictic Sakinaw Lake. Applied and Environmental Microbiology. 80: 6807-18. PMID 25172853 DOI: 10.1128/AEM.01774-14  0.403
2014 Wright JJ, Mewis K, Hanson NW, Konwar KM, Maas KR, Hallam SJ. Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle. The Isme Journal. 8: 455-68. PMID 24030600 DOI: 10.1038/ismej.2013.152  0.311
2013 Garrity GM, Banfield J, Eisen J, van der Lelie N, McMahon T, Rusch D, Delong E, Moran MA, Currie C, Furhman J, Hallam S, Hugenholtz P, Moran N, Nelson K, Roberts R, et al. Prokaryotic Super Program Advisory Committee DOE Joint Genome Institute, Walnut Creek, CA, March 27, 2013. Standards in Genomic Sciences. 8: 561-70. PMID 24501639 DOI: 10.4056/Sigs.4638348  0.524
2013 Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng JF, Darling A, Malfatti S, Swan BK, Gies EA, Dodsworth JA, Hedlund BP, Tsiamis G, Sievert SM, Liu WT, ... ... Hallam SJ, et al. Insights into the phylogeny and coding potential of microbial dark matter. Nature. 499: 431-7. PMID 23851394 DOI: 10.1038/Nature12352  0.414
2013 Swan BK, Tupper B, Sczyrba A, Lauro FM, Martinez-Garcia M, González JM, Luo H, Wright JJ, Landry ZC, Hanson NW, Thompson BP, Poulton NJ, Schwientek P, Acinas SG, Giovannoni SJ, ... ... Hallam SJ, et al. Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proceedings of the National Academy of Sciences of the United States of America. 110: 11463-8. PMID 23801761 DOI: 10.1073/Pnas.1304246110  0.423
2013 Solonenko SA, Ignacio-Espinoza JC, Alberti A, Cruaud C, Hallam S, Konstantinidis K, Tyson G, Wincker P, Sullivan MB. Sequencing platform and library preparation choices impact viral metagenomes. Bmc Genomics. 14: 320. PMID 23663384 DOI: 10.1186/1471-2164-14-320  0.693
2012 Chen HP, Zhu SH, Casabon I, Hallam SJ, Crocker FH, Mohn WW, Indest KJ, Eltis LD. Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium. Applied and Environmental Microbiology. 78: 7798-800. PMID 22923396 DOI: 10.1128/Aem.02120-12  0.34
2012 Sauter LM, Latypova E, Smalley NE, Lidstrom ME, Hallam S, Kalyuzhnaya MG. Methanotrophic communities of Saanich Inlet: a microcosm perspective. Systematic and Applied Microbiology. 35: 198-203. PMID 22406542 DOI: 10.1016/J.Syapm.2011.10.006  0.366
2009 Lee S, Hallam SJ. Extraction of high molecular weight genomic DNA from soils and sediments. Journal of Visualized Experiments : Jove. PMID 19904232 DOI: 10.3791/1569  0.31
2006 Hallam SJ, Konstantinidis KT, Putnam N, Schleper C, Watanabe Y, Sugahara J, Preston C, de la Torre J, Richardson PM, DeLong EF. Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum. Proceedings of the National Academy of Sciences of the United States of America. 103: 18296-301. PMID 17114289 DOI: 10.1073/Pnas.0608549103  0.795
2006 Yoshinari S, Itoh T, Hallam SJ, DeLong EF, Yokobori S, Yamagishi A, Oshima T, Kita K, Watanabe Y. Archaeal pre-mRNA splicing: a connection to hetero-oligomeric splicing endonuclease. Biochemical and Biophysical Research Communications. 346: 1024-32. PMID 16781672 DOI: 10.1016/J.Bbrc.2006.06.011  0.468
2006 Hallam SJ, Mincer TJ, Schleper C, Preston CM, Roberts K, Richardson PM, DeLong EF. Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota. Plos Biology. 4: e95. PMID 16533068 DOI: 10.1371/Journal.Pbio.0040095  0.757
2006 DeLong EF, Preston CM, Mincer T, Rich V, Hallam SJ, Frigaard NU, Martinez A, Sullivan MB, Edwards R, Brito BR, Chisholm SW, Karl DM. Community genomics among stratified microbial assemblages in the ocean's interior. Science (New York, N.Y.). 311: 496-503. PMID 16439655 DOI: 10.1126/Science.1120250  0.737
2006 DeLong E, Hallam S, Mincer T, Schleper C, Preston C, Roberts K, Richardson P. Correction: Pathways of Carbon Assimilation and Ammonia Oxidation Suggested by Environmental Genomic Analyses of Marine Crenarchaeota Plos Biology. 4: e437. DOI: 10.1371/journal.pbio.0040437  0.77
2005 Cubonová L, Sandman K, Hallam SJ, Delong EF, Reeve JN. Histones in crenarchaea. Journal of Bacteriology. 187: 5482-5. PMID 16030242 DOI: 10.1128/Jb.187.15.5482-5485.2005  0.444
2004 Hallam SJ, Putnam N, Preston CM, Detter JC, Rokhsar D, Richardson PM, DeLong EF. Reverse methanogenesis: testing the hypothesis with environmental genomics. Science (New York, N.Y.). 305: 1457-62. PMID 15353801 DOI: 10.1126/Science.1100025  0.765
2003 Hallam SJ, Girguis PR, Preston CM, Richardson PM, DeLong EF. Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea. Applied and Environmental Microbiology. 69: 5483-91. PMID 12957937 DOI: 10.1128/Aem.69.9.5483-5491.2003  0.787
2003 Girguis PR, Orphan VJ, Hallam SJ, DeLong EF. Growth and methane oxidation rates of anaerobic methanotrophic archaea in a continuous-flow bioreactor. Applied and Environmental Microbiology. 69: 5472-82. PMID 12957936 DOI: 10.1128/Aem.69.9.5472-5482.2003  0.732
2003 Goffredi SK, Hurtado LA, Hallam S, Vrijenhoek RC. Evolutionary relationships of deep-sea vent and cold seep clams (Mollusca: Vesicomyidae) of the "pacifica/lepta" species complex Marine Biology. 142: 311-320. DOI: 10.1007/S00227-002-0941-3  0.333
2002 Hallam SJ, Goncharov A, McEwen J, Baran R, Jin Y. SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans. Nature Neuroscience. 5: 1137-46. PMID 12379863 DOI: 10.1038/Nn959  0.459
1998 Hallam SJ, Jin Y. lin-14 regulates the timing of synaptic remodelling in Caenorhabditis elegans. Nature. 395: 78-82. PMID 9738501 DOI: 10.1038/25757  0.482
Low-probability matches (unlikely to be authored by this person)
2013 Konwar KM, Hanson NW, Pagé AP, Hallam SJ. MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information. Bmc Bioinformatics. 14: 202. PMID 23800136 DOI: 10.1186/1471-2105-14-202  0.299
2021 Kieft K, Zhou Z, Anderson RE, Buchan A, Campbell BJ, Hallam SJ, Hess M, Sullivan MB, Walsh DA, Roux S, Anantharaman K. Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages. Nature Communications. 12: 3503. PMID 34108477 DOI: 10.1038/s41467-021-23698-5  0.298
2009 Schmidtova J, Hallam SJ, Baldwin SA. Phylogenetic diversity of transition and anoxic zone bacterial communities within a near-shore anoxic basin: Nitinat Lake. Environmental Microbiology. 11: 3233-51. PMID 19735278 DOI: 10.1111/j.1462-2920.2009.02044.x  0.297
2023 Morgan-Lang C, Hallam SJ. A Guide to Gene-Centric Analysis Using TreeSAPP. Current Protocols. 3: e671. PMID 36801973 DOI: 10.1002/cpz1.671  0.293
2011 Schulze-Makuch D, Haque S, de Sousa Antonio MR, Ali D, Hosein R, Song YC, Yang J, Zaikova E, Beckles DM, Guinan E, Lehto HJ, Hallam SJ. Microbial life in a liquid asphalt desert. Astrobiology. 11: 241-58. PMID 21480792 DOI: 10.1089/Ast.2010.0488  0.289
2020 Gazitúa MC, Vik DR, Roux S, Gregory AC, Bolduc B, Widner B, Mulholland MR, Hallam SJ, Ulloa O, Sullivan MB. Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters. The Isme Journal. PMID 33199808 DOI: 10.1038/s41396-020-00825-6  0.286
2015 Cardenas E, Kranabetter JM, Hope G, Maas KR, Hallam S, Mohn WW. Forest harvesting reduces the soil metagenomic potential for biomass decomposition. The Isme Journal. PMID 25909978 DOI: 10.1038/Ismej.2015.57  0.284
2017 Wilhelm RC, Cardenas E, Leung H, Maas K, Hartmann M, Hahn A, Hallam S, Mohn WW. A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting. Scientific Data. 4: 170092. PMID 28765786 DOI: 10.1038/Sdata.2017.92  0.278
2020 M A Basher AR, Hallam SJ. Leveraging heterogeneous network embedding for metabolic pathway prediction. Bioinformatics (Oxford, England). PMID 33305310 DOI: 10.1093/bioinformatics/btaa906  0.274
2012 Orsi W, Song YC, Hallam S, Edgcomb V. Effect of oxygen minimum zone formation on communities of marine protists. The Isme Journal. 6: 1586-601. PMID 22402396 DOI: 10.1038/ismej.2012.7  0.273
2017 Hawley AK, Torres-Beltrán M, Zaikova E, Walsh DA, Mueller A, Scofield M, Kheirandish S, Payne C, Pakhomova L, Bhatia M, Shevchuk O, Gies EA, Fairley D, Malfatti SA, Norbeck AD, ... ... Hallam SJ, et al. A compendium of multi-omic sequence information from the Saanich Inlet water column. Scientific Data. 4: 170160. PMID 29087368 DOI: 10.1038/Sdata.2017.160  0.269
2022 Koch M, Noonan AJC, Qiu Y, Dofher K, Kieft B, Mottahedeh S, Shastri M, Hallam SJ. The survivor strain: isolation and characterization of AB48, a filamentous phototactic cyanobacterium with biotechnological potential. Frontiers in Bioengineering and Biotechnology. 10: 932695. PMID 36046667 DOI: 10.3389/fbioe.2022.932695  0.268
2009 Walsh DA, Zaikova E, Howes CG, Song YC, Wright JJ, Tringe SG, Tortell PD, Hallam SJ. Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones. Science (New York, N.Y.). 326: 578-82. PMID 19900896 DOI: 10.1126/science.1175309  0.267
2014 Hawley AK, Brewer HM, Norbeck AD, Paša-Toli? L, Hallam SJ. Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes. Proceedings of the National Academy of Sciences of the United States of America. 111: 11395-400. PMID 25053816 DOI: 10.1073/pnas.1322132111  0.264
2014 Hanson NW, Konwar KM, Hawley AK, Altman T, Karp PD, Hallam SJ. Metabolic pathways for the whole community. Bmc Genomics. 15: 619. PMID 25048541 DOI: 10.1186/1471-2164-15-619  0.262
2015 Armstrong Z, Mewis K, Strachan C, Hallam SJ. Biocatalysts for biomass deconstruction from environmental genomics. Current Opinion in Chemical Biology. 29: 18-25. PMID 26231123 DOI: 10.1016/j.cbpa.2015.06.032  0.26
2015 Labonté JM, Hallam SJ, Suttle CA. Previously unknown evolutionary groups dominate the ssDNA gokushoviruses in oxic and anoxic waters of a coastal marine environment. Frontiers in Microbiology. 6: 315. PMID 25954254 DOI: 10.3389/Fmicb.2015.00315  0.26
2014 Hanson NW, Konwar KM, Wu SJ, Hallam SJ. MetaPathways v2.0: A master-worker model for environmental pathway/genome database construction on grids and clouds 2014 Ieee Conference On Computational Intelligence in Bioinformatics and Computational Biology, Cibcb 2014. DOI: 10.1109/CIBCB.2014.6845516  0.258
2009 Taupp M, Lee S, Hawley A, Yang J, Hallam SJ. Large insert environmental genomic library production. Journal of Visualized Experiments : Jove. PMID 19776717 DOI: 10.3791/1387  0.253
2024 Choy WH, Adler A, Morgan-Lang C, Gough EK, Hallam SJ, Manges AR, Chew BH, Penniston K, Miller A, Lange D. Deficient butyrate metabolism in the intestinal microbiome is a potential risk factor for recurrent kidney stone disease. Urolithiasis. 52: 38. PMID 38413462 DOI: 10.1007/s00240-024-01534-x  0.245
2018 Armstrong Z, Mewis K, Liu F, Morgan-Lang C, Scofield M, Durno E, Chen HM, Mehr K, Withers SG, Hallam SJ. Metagenomics reveals functional synergy and novel polysaccharide utilization loci in the Castor canadensis fecal microbiome. The Isme Journal. PMID 30013164 DOI: 10.1038/S41396-018-0215-9  0.244
2015 Lawson CE, Strachan BJ, Hanson NW, Hahn AS, Hall ER, Rabinowitz B, Mavinic DS, Ramey WD, Hallam SJ. Rare taxa have potential to make metabolic contributions in enhanced biological phosphorus removal ecosystems. Environmental Microbiology. PMID 25857222 DOI: 10.1111/1462-2920.12875  0.242
2021 Ulloa O, Henríquez-Castillo C, Ramírez-Flandes S, Plominsky AM, Murillo AA, Morgan-Lang C, Hallam SJ, Stepanauskas R. The cyanobacterium has divergent light-harvesting antennae and may have evolved in a low-oxygen ocean. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33707213 DOI: 10.1073/pnas.2025638118  0.238
2013 An D, Caffrey SM, Soh J, Agrawal A, Brown D, Budwill K, Dong X, Dunfield PF, Foght J, Gieg LM, Hallam SJ, Hanson NW, He Z, Jack TR, Klassen J, et al. Metagenomics of hydrocarbon resource environments indicates aerobic taxa and genes to be unexpectedly common. Environmental Science & Technology. 47: 10708-17. PMID 23889694 DOI: 10.1021/Es4020184  0.236
2014 Roux S, Hawley AK, Beltran MT, Scofeld M, Schwientek P, Stepanauskas R, Woyke T, Hallam SJ, Sullivan MB. Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics Elife. 2014. DOI: 10.7554/eLife.03125.001  0.235
2015 VanInsberghe D, Maas KR, Cardenas E, Strachan CR, Hallam SJ, Mohn WW. Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils. The Isme Journal. PMID 25909973 DOI: 10.1038/Ismej.2015.54  0.233
2014 Buck KR, Barry JP, Hallam SJ. Thioploca spp. sheaths as niches for bacterial and protistan assemblages Marine Ecology. 35: 395-400. DOI: 10.1111/Maec.12076  0.232
2012 Leung K, Zahn H, Leaver T, Konwar KM, Hanson NW, Pagé AP, Lo CC, Chain PS, Hallam SJ, Hansen CL. A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities. Proceedings of the National Academy of Sciences of the United States of America. 109: 7665-70. PMID 22547789 DOI: 10.1073/Pnas.1106752109  0.229
2011 Hartmann M, Howes CG, Veldre V, Schneider S, Vaishampayan PA, Yannarell AC, Quince C, Johansson P, Björkroth KJ, Abarenkov K, Hallam SJ, Mohn WW, Nilsson RH. V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets. Fems Microbiology Letters. 319: 140-5. PMID 21453324 DOI: 10.1111/J.1574-6968.2011.02274.X  0.227
2013 Allers E, Wright JJ, Konwar KM, Howes CG, Beneze E, Hallam SJ, Sullivan MB. Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean. The Isme Journal. 7: 256-68. PMID 23151638 DOI: 10.1038/ismej.2012.108  0.227
2021 Lin H, Ascher DB, Myung Y, Lamborg CH, Hallam SJ, Gionfriddo CM, Holt KE, Moreau JW. Mercury methylation by metabolically versatile and cosmopolitan marine bacteria. The Isme Journal. PMID 33504941 DOI: 10.1038/s41396-020-00889-4  0.225
1995 Schwartz EL, Hallam S, Gallagher RE, Wiernik PH. Inhibition of all-trans-retinoic acid metabolism by fluconazole in vitro and in patients with acute promyelocytic leukemia. Biochemical Pharmacology. 50: 923-8. PMID 7575674 DOI: 10.1016/0006-2952(95)00213-J  0.225
2017 Hallam SJ, Torres-Beltrán M, Hawley AK. Monitoring microbial responses to ocean deoxygenation in a model oxygen minimum zone. Scientific Data. 4: 170158. PMID 29087370 DOI: 10.1038/sdata.2017.158  0.223
2013 Hawley AK, Kheirandish S, Mueller A, Leung HT, Norbeck AD, Brewer HM, Pasa-Tolic L, Hallam SJ. Molecular tools for investigating microbial community structure and function in oxygen-deficient marine waters. Methods in Enzymology. 531: 305-29. PMID 24060128 DOI: 10.1016/B978-0-12-407863-5.00016-2  0.223
2013 Mewis K, Armstrong Z, Song YC, Baldwin SA, Withers SG, Hallam SJ. Biomining active cellulases from a mining bioremediation system. Journal of Biotechnology. 167: 462-71. PMID 23906845 DOI: 10.1016/J.Jbiotec.2013.07.015  0.217
2019 Armstrong Z, Liu F, Kheirandish S, Chen HM, Mewis K, Duo T, Morgan-Lang C, Hallam SJ, Withers SG. High-Throughput Recovery and Characterization of Metagenome-Derived Glycoside Hydrolase-Containing Clones as a Resource for Biocatalyst Development. Msystems. 4. PMID 31164449 DOI: 10.1128/mSystems.00082-19  0.216
2011 Hallam SJ, Pagé AP, Constan L, Song YC, Norbeck AD, Brewer H, Pasa-Tolic L. Molecular tools for investigating ANME community structure and function. Methods in Enzymology. 494: 75-90. PMID 21402210 DOI: 10.1016/B978-0-12-385112-3.00004-4  0.211
2010 Zaikova E, Walsh DA, Stilwell CP, Mohn WW, Tortell PD, Hallam SJ. Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia. Environmental Microbiology. 12: 172-91. PMID 19788414 DOI: 10.1111/J.1462-2920.2009.02058.X  0.21
2012 Wright JJ, Konwar KM, Hallam SJ. Microbial ecology of expanding oxygen minimum zones. Nature Reviews. Microbiology. 10: 381-94. PMID 22580367 DOI: 10.1038/nrmicro2778  0.21
2017 Thompson KJ, Simister RL, Hahn AS, Hallam SJ, Crowe SA. Nutrient Acquisition and the Metabolic Potential of Photoferrotrophic Chlorobi. Frontiers in Microbiology. 8: 1212. PMID 28729857 DOI: 10.3389/fmicb.2017.01212  0.207
2016 Hahn AS, Konwar KM, Louca S, Hanson NW, Hallam SJ. The information science of microbial ecology. Current Opinion in Microbiology. 31: 209-216. PMID 27183115 DOI: 10.1016/j.mib.2016.04.014  0.206
2013 Lawson CE, Rabinowitz B, Mavinic DS, Ramey WD, Hallam SJ. Structure of the Active Microbial Community in a Pilot-Scale Enhanced Biological Phosphorus Removal Process Revealed Through 454 Pyrotag Sequencing Proceedings of the Water Environment Federation. 2013: 6519-6524. DOI: 10.2175/193864713813716921  0.206
2013 Hurwitz BL, Hallam SJ, Sullivan MB. Metabolic reprogramming by viruses in the sunlit and dark ocean. Genome Biology. 14: R123. PMID 24200126 DOI: 10.1186/gb-2013-14-11-r123  0.203
2017 Torres-Beltrán M, Hawley AK, Capelle D, Zaikova E, Walsh DA, Mueller A, Scofield M, Payne C, Pakhomova L, Kheirandish S, Finke J, Bhatia M, Shevchuk O, Gies EA, Fairley D, ... ... Hallam SJ, et al. A compendium of geochemical information from the Saanich Inlet water column. Scientific Data. 4: 170159. PMID 29087371 DOI: 10.1038/Sdata.2017.159  0.201
2015 Konwar KM, Hanson NW, Bhatia MP, Kim D, Wu SJ, Hahn AS, Morgan-Lang C, Cheung HK, Hallam SJ. MetaPathways v2.5: Quantitative functional, taxonomic, and usability improvements. Bioinformatics (Oxford, England). PMID 26076725 DOI: 10.1093/bioinformatics/btv361  0.201
2003 Won YJ, Hallam SJ, O'Mullan GD, Pan IL, Buck KR, Vrijenhoek RC. Environmental acquisition of thiotrophic endosymbionts by deep-sea mussels of the genus bathymodiolus. Applied and Environmental Microbiology. 69: 6785-92. PMID 14602641 DOI: 10.1128/Aem.69.11.6785-6792.2003  0.197
2014 Roux S, Hawley AK, Torres Beltran M, Scofield M, Schwientek P, Stepanauskas R, Woyke T, Hallam SJ, Sullivan MB. Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics. Elife. 3: e03125. PMID 25171894 DOI: 10.7554/eLife.03125  0.194
2013 Anderson RE, Beltrán MT, Hallam SJ, Baross JA. Microbial community structure across fluid gradients in the Juan de Fuca Ridge hydrothermal system. Fems Microbiology Ecology. 83: 324-39. PMID 22928928 DOI: 10.1111/J.1574-6941.2012.01478.X  0.192
2011 Mewis K, Taupp M, Hallam SJ. A high throughput screen for biomining cellulase activity from metagenomic libraries. Journal of Visualized Experiments : Jove. PMID 21307835 DOI: 10.3791/2461  0.191
1997 Wadler S, Schwartz EL, Haynes H, Rameau R, Quish A, Mandeli J, Gallagher R, Hallam S, Fields A, Goldberg G, McGill F, Jennings S, Wallach RC, Runowicz CD. All-trans retinoic acid and interferon-alpha-2a in patients with metastatic or recurrent carcinoma of the uterine cervix: clinical and pharmacokinetic studies. New York Gynecologic Oncology Group. Cancer. 79: 1574-80. PMID 9118041 DOI: 10.1002/(Sici)1097-0142(19970415)79:8<1574::Aid-Cncr20>3.0.Co;2-U  0.191
2018 Blackmore S, Vriens B, Sorensen M, Power IM, Smith L, Hallam SJ, Mayer KU, Beckie RD. Microbial and geochemical controls on waste rock weathering and drainage quality. The Science of the Total Environment. 640: 1004-1014. PMID 30021267 DOI: 10.1016/J.Scitotenv.2018.05.374  0.189
1997 Comerci J, Hallam S, Goldberg G, Runowicz C, Fields A, Wadler S, Gallagher R. Expression of retinoic acid receptor-beta 2 mRNA in normal cervical epithelium and cervical squamous cell carcinoma. International Journal of Oncology. 11: 983-8. PMID 21528293 DOI: 10.3892/Ijo.11.5.983  0.188
2019 Torres-Beltrán M, Mueller A, Scofield M, Pachiadaki MG, Taylor C, Tyshchenko K, Michiels C, Lam P, Ulloa O, Jürgens K, Hyun J, Edgcomb VP, Crowe SA, Hallam SJ. Sampling and Processing Methods Impact Microbial Community Structure and Potential Activity in a Seasonally Anoxic Fjord: Saanich Inlet, British Columbia Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00132  0.184
2014 Strachan CR, Singh R, VanInsberghe D, Ievdokymenko K, Budwill K, Mohn WW, Eltis LD, Hallam SJ. Metagenomic scaffolds enable combinatorial lignin transformation. Proceedings of the National Academy of Sciences of the United States of America. 111: 10143-8. PMID 24982175 DOI: 10.1073/Pnas.1401631111  0.179
2021 Traving SJ, Kellogg CTE, Ross T, McLaughlin R, Kieft B, Ho GY, Peña A, Krzywinski M, Robert M, Hallam SJ. Prokaryotic responses to a warm temperature anomaly in northeast subarctic Pacific waters. Communications Biology. 4: 1217. PMID 34686760 DOI: 10.1038/s42003-021-02731-9  0.177
2022 Van De Ven CJC, Laurenzi L, Arnold AC, Hallam SJ, Mayer KU. The nature of gas production patterns associated with methanol degradation in natural aquifer sediments: A microcosm study. Journal of Contaminant Hydrology. 247: 103988. PMID 35303484 DOI: 10.1016/j.jconhyd.2022.103988  0.177
2015 Carlotti E, Wrench D, Rosignoli G, Marzec J, Sangaralingam A, Hazanov L, Michaeli M, Hallam S, Chaplin T, Iqbal S, Calaminici M, Young B, Mehr R, Campbell P, Fitzgibbon J, et al. High Throughput Sequencing Analysis of the Immunoglobulin Heavy Chain Gene from Flow-Sorted B Cell Sub-Populations Define the Dynamics of Follicular Lymphoma Clonal Evolution. Plos One. 10: e0134833. PMID 26325507 DOI: 10.1371/journal.pone.0134833  0.175
2018 Hallam SJ, Koma T, Maruyama J, Paessler S. Review of Biology and Replication. Frontiers in Microbiology. 9: 1751. PMID 30123198 DOI: 10.3389/Fmicb.2018.01751  0.174
2007 Lobban CS, Hallam SJ, Mukherjee P, Petrich JW. Photophysics and multifunctionality of hypericin-like pigments in heterotrich ciliates: a phylogenetic perspective. Photochemistry and Photobiology. 83: 1074-94. PMID 17880503 DOI: 10.1111/J.1751-1097.2007.00191.X  0.172
2018 Levy-Booth DJ, Giesbrecht IJW, Kellogg CTE, Heger TJ, D'Amore DV, Keeling PJ, Hallam SJ, Mohn WW. Seasonal and ecohydrological regulation of active microbial populations involved in DOC, CO, and CH fluxes in temperate rainforest soil. The Isme Journal. PMID 30538276 DOI: 10.1038/S41396-018-0334-3  0.171
2022 Davenport B, Hallam SJ. Emerging enzyme surface display systems for waste resource recovery. Environmental Microbiology. PMID 36369958 DOI: 10.1111/1462-2920.16284  0.166
2009 Hartmann M, Lee S, Hallam SJ, Mohn WW. Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands. Environmental Microbiology. 11: 3045-62. PMID 19659501 DOI: 10.1111/J.1462-2920.2009.02008.X  0.158
2012 Ulloa O, Wright JJ, Belmar L, Hallam SJ. Pelagic oxygen minimum zone microbial communities The Prokaryotes: Prokaryotic Communities and Ecophysiology. 113-122. DOI: 10.1007/978-3-642-30123-0_45  0.158
2024 Mills DB, Simister RL, Sehein TR, Hallam SJ, Sperling EA, Crowe SA. Constraining the oxygen requirements for modern microbial eukaryote diversity. Proceedings of the National Academy of Sciences of the United States of America. 121: e2303754120. PMID 38165897 DOI: 10.1073/pnas.2303754120  0.157
2019 Armstrong Z, Liu F, Chen H, Hallam SJ, Withers SG. Systematic Screening of Synthetic Gene-Encoded Enzymes for Synthesis of Modified Glycosides Acs Catalysis. 9: 3219-3227. DOI: 10.1021/Acscatal.8B05179  0.156
2011 Taupp M, Mewis K, Hallam SJ. The art and design of functional metagenomic screens. Current Opinion in Biotechnology. 22: 465-72. PMID 21440432 DOI: 10.1016/j.copbio.2011.02.010  0.152
2015 Hahn AS, Hanson NW, Kim D, Konwar KM, Hallam SJ. Assembly independent functional annotation of short-read data using SOFA: Short-ORF functional annotation 2015 Ieee Conference On Computational Intelligence in Bioinformatics and Computational Biology, Cibcb 2015. DOI: 10.1109/CIBCB.2015.7300324  0.148
2012 Bourbonnais A, Juniper SK, Butterfield DA, Devol AH, Kuypers MMM, Lavik G, Hallam SJ, Wenk CB, Chang BX, Murdock SA, Lehmann MF. Activity and abundance of denitrifying bacteria in the subsurface biosphere of diffuse hydrothermal vents of the Juan de Fuca Ridge Biogeosciences. 9: 4661-4678. DOI: 10.5194/Bg-9-4661-2012  0.144
2018 Pawar SV, Hallam SJ, Yadav VG. Metagenomic discovery of a novel transaminase for valorization of monoaromatic compounds. Rsc Advances. 8: 22490-22497. PMID 35539725 DOI: 10.1039/c8ra02764a  0.142
2014 Perreault-Micale C, Frieden A, Kennedy CJ, Neitzel D, Sullivan J, Faulkner N, Hallam S, Greger V. Truncating variants in the majority of the cytoplasmic domain of PCDH15 are unlikely to cause Usher syndrome 1F. The Journal of Molecular Diagnostics : Jmd. 16: 673-8. PMID 25307757 DOI: 10.1016/J.Jmoldx.2014.07.001  0.141
2012 Hartmann M, Howes CG, VanInsberghe D, Yu H, Bachar D, Christen R, Henrik Nilsson R, Hallam SJ, Mohn WW. Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests. The Isme Journal. 6: 2199-218. PMID 22855212 DOI: 10.1038/Ismej.2012.84  0.141
1998 Hoffman JD, Hallam SE, Venne VL, Lyon E, Ward K. Implications of a novel cryptic splice site in the BRCA1 gene. American Journal of Medical Genetics. 80: 140-4. PMID 9805131 DOI: 10.1002/(SICI)1096-8628(19981102)80:2<140::AID-AJMG10>3.0.CO;2-L  0.14
2019 Michiels CC, Huggins JA, Giesbrecht KE, Spence JS, Simister RL, Varela DE, Hallam SJ, Crowe SA. Rates and Pathways of N2 Production in a Persistently Anoxic Fjord: Saanich Inlet, British Columbia Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00027  0.136
2005 Salerno JL, Macko SA, Hallam SJ, Bright M, Won YJ, McKiness Z, Van Dover CL. Characterization of symbiont populations in life-history stages of mussels from chemosynthetic environments. The Biological Bulletin. 208: 145-55. PMID 15837964 DOI: 10.2307/3593123  0.135
2009 Walsh DA, Zaikova E, Hallam SJ. Small volume (1-3L) filtration of coastal seawater samples. Journal of Visualized Experiments : Jove. PMID 19543201 DOI: 10.3791/1163  0.135
2016 Bristow LA, Dalsgaard T, Tiano L, Mills DB, Bertagnolli AD, Wright JJ, Hallam SJ, Ulloa O, Canfield DE, Revsbech NP, Thamdrup B. Ammonium and nitrite oxidation at nanomolar oxygen concentrations in oxygen minimum zone waters. Proceedings of the National Academy of Sciences of the United States of America. 113: 10601-6. PMID 27601665 DOI: 10.1073/Pnas.1600359113  0.133
2011 Walsh DA, Hallam SJ. Bacterial Community Structure and Dynamics in a Seasonally Anoxic Fjord: Saanich Inlet, British Columbia Handbook of Molecular Microbial Ecology Ii: Metagenomics in Different Habitats. 253-267. DOI: 10.1002/9781118010549.ch25  0.133
2014 Hallam S, Nelson H, Greger V, Perreault-Micale C, Davie J, Faulkner N, Neitzel D, Casey K, Umbarger MA, Chennagiri N, Kramer AC, Porreca GJ, Kennedy CJ. Validation for clinical use of, and initial clinical experience with, a novel approach to population-based carrier screening using high-throughput, next-generation DNA sequencing. The Journal of Molecular Diagnostics : Jmd. 16: 180-9. PMID 24374108 DOI: 10.1016/J.Jmoldx.2013.10.006  0.132
2010 Weidner M, Taupp M, Hallam SJ. Expression of recombinant proteins in the methylotrophic yeast Pichia pastoris. Journal of Visualized Experiments : Jove. PMID 20186119 DOI: 10.3791/1862  0.131
2018 Kenward PA, Simister RL, Morgan-Lang C, Finke N, Sturm A, Hallam SJ, Crowe SA. Recovering cellular biomass from fluids using chemical flocculation. Environmental Microbiology Reports. PMID 30230256 DOI: 10.1111/1758-2229.12690  0.131
2021 Khoei S, Stokes A, Kieft B, Kadota P, Hallam SJ, Eskicioglu C. Biochar amendment rapidly shifts microbial community structure with enhanced thermophilic digestion activity. Bioresource Technology. 341: 125864. PMID 34523581 DOI: 10.1016/j.biortech.2021.125864  0.129
2018 Macdonald SS, Patel A, Larmour VLC, Morgan-Lang C, Hallam SJ, Mark BL, Withers SG. Structural and mechanistic analysis of a β-glycoside phosphorylase identified by screening a metagenomic library. The Journal of Biological Chemistry. PMID 29317495 DOI: 10.1074/Jbc.Ra117.000948  0.128
2015 Perreault-Micale C, Davie J, Breton B, Hallam S, Greger V. A rigorous approach for selection of optimal variant sets for carrier screening with demonstration of clinical utility. Molecular Genetics & Genomic Medicine. 3: 363-73. PMID 26247052 DOI: 10.1002/mgg3.148  0.123
2016 Hallam S, Creech A, McQueen H, Varvarigou M, Gaunt H. The facilitator of community music-making with older learners: Characteristics, Motivations and challenges International Journal of Music Education. 34: 19-31. DOI: 10.1177/0255761415617039  0.122
2009 Walsh DA, Zaikova E, Hallam SJ. Large volume (20L+) filtration of coastal seawater samples. Journal of Visualized Experiments : Jove. PMID 19543200 DOI: 10.3791/1161  0.122
2024 Lin N, Taghizadehmakoei A, Polovina L, McLean I, Santana-Martínez JC, Naese C, Moraes C, Hallam SJ, Dahmen J. 3D Bioprinting of Food Grade Hydrogel Infused with Living Mycelium in Non-sterile Conditions. Acs Applied Bio Materials. PMID 38587496 DOI: 10.1021/acsabm.4c00048  0.12
2008 Hallam S. Where now? The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0052  0.12
2019 Macdonald SS, Armstrong Z, Morgan-Lang C, Osowiecka M, Robinson K, Hallam SJ, Withers SG. Development and Application of a High-Throughput Functional Metagenomic Screen for Glycoside Phosphorylases. Cell Chemical Biology. PMID 31080075 DOI: 10.1016/J.Chembiol.2019.03.017  0.12
2016 Torres-Beltrán M, Hawley AK, Capelle DW, Bhatia MP, Evan Durno W, Tortell PD, Hallam SJ. Methanotrophic Community Dynamics in a Seasonally Anoxic Fjord: Saanich Inlet, British Columbia Frontiers in Marine Science. 3. DOI: 10.3389/fmars.2016.00268  0.118
2020 Noonan AJC, Qiu Y, Ho JCH, Ocampo J, Vreugdenhil KA, Marr RA, Zhao Z, Yoshikuni Y, Hallam SJ. CRAGE-mediated insertion of fluorescent chromosomal markers for accurate and scalable measurement of co-culture dynamics in . Synthetic Biology (Oxford, England). 5: ysaa015. PMID 33381654 DOI: 10.1093/synbio/ysaa015  0.118
2017 Capelle DW, Hawley AK, Hallam SJ, Tortell PD. A multi-year time-series of N2 O dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia Limnology and Oceanography. 63: 524-539. DOI: 10.1002/Lno.10645  0.117
2003 Won Y, Hallam SJ, O'Mullan GD, Vrijenhoek RC. Cytonuclear disequilibrium in a hybrid zone involving deep-sea hydrothermal vent mussels of the genus Bathymodiolus. Molecular Ecology. 12: 3185-90. PMID 14629398 DOI: 10.1046/J.1365-294X.2003.01974.X  0.116
2012 Hallam S, Creech A, Varvarigou M, McQueen H. Perceived benefits of active engagement with making music in community settings International Journal of Community Music. 5: 155-174. DOI: 10.1386/ijcm.5.2.155_1  0.11
2009 Zaikova E, Hawley A, Walsh DA, Hallam SJ. Seawater sampling and collection. Journal of Visualized Experiments : Jove. PMID 19536065 DOI: 10.3791/1159  0.109
2021 Wardman JF, Rahfeld P, Liu F, Morgan-Lang C, Sim L, Hallam SJ, Withers SG. Discovery and Development of Promiscuous O-Glycan Hydrolases for Removal of Intact Sialyl T-Antigen. Acs Chemical Biology. PMID 34309358 DOI: 10.1021/acschembio.1c00316  0.102
2023 Vega AA, Marshall EA, Noonan AJC, Filho FSL, Yang J, Stewart GL, Johnson FD, Vucic EA, Pewarchuk ME, Shah PP, Clem BF, Nislow C, Lam S, Lockwood WW, Hallam SJ, et al. Methionine-producing tumor micro(be) environment fuels growth of solid tumors. Cellular Oncology (Dordrecht). PMID 37318751 DOI: 10.1007/s13402-023-00832-7  0.098
2022 Sun E, König SG, Cirstea M, Hallam SJ, Graves ML, Oliver DC. Development of a data science CURE in microbiology using publicly available microbiome datasets. Frontiers in Microbiology. 13: 1018237. PMID 36312919 DOI: 10.3389/fmicb.2022.1018237  0.098
2011 Horak IG, Welman S, Hallam SL, Lutermann H, Mzilikazi N. Ticks of four-toed elephant shrews and Southern African hedgehogs. The Onderstepoort Journal of Veterinary Research. 78: 243. PMID 23327207 DOI: 10.4102/ojvr.v78i1.243  0.097
2017 Ho JCH, Pawar SV, Hallam SJ, Yadav VG. An Improved Whole-Cell Biosensor for the Discovery of Lignin-Transforming Enzymes in Functional Metagenomic Screens. Acs Synthetic Biology. PMID 29182267 DOI: 10.1021/acssynbio.7b00412  0.096
2014 Hallam S, Creech A, Varvarigou M, McQueen H, Gaunt H. Does active engagement in community music support the well-being of older people? Arts and Health. 6: 101-116. DOI: 10.1080/17533015.2013.809369  0.096
2015 Hallam SJ, McCutcheon JP. Microbes don't play solitaire: how cooperation trumps isolation in the microbial world. Environmental Microbiology Reports. 7: 26-8. PMID 25721597 DOI: 10.1111/1758-2229.12248  0.095
2013 Hoffman JD, Greger V, Strovel ET, Blitzer MG, Umbarger MA, Kennedy C, Bishop B, Saunders P, Porreca GJ, Schienda J, Davie J, Hallam S, Towne C. Next-generation DNA sequencing of HEXA: a step in the right direction for carrier screening. Molecular Genetics & Genomic Medicine. 1: 260-8. PMID 24498621 DOI: 10.1002/Mgg3.37  0.095
2016 Hallam SJ, Vásquez M. Editorial overview: Remapping the body of the world: Exploring interactions at the interface of microbial ecology, biological engineering and information science. Current Opinion in Microbiology. PMID 27199093 DOI: 10.1016/j.mib.2016.05.001  0.092
2009 Wright JJ, Lee S, Zaikova E, Walsh DA, Hallam SJ. DNA extraction from 0.22 microM Sterivex filters and cesium chloride density gradient centrifugation. Journal of Visualized Experiments : Jove. PMID 19767717 DOI: 10.3791/1352  0.091
2020 Hallam SJ, Manning JT, Maruyama J, Seregin A, Huang C, Walker DH, de la Torre JC, Paessler S. A single mutation (V64G) within the RING Domain of Z attenuates Junin virus. Plos Neglected Tropical Diseases. 14: e0008555. PMID 32976538 DOI: 10.1371/journal.pntd.0008555  0.09
2015 Kim D, Hahn AS, Wu SJ, Hanson NW, Konwar KM, Hallam SJ. FragGeneScan-plus for scalable high-throughput short-read open reading frame prediction 2015 Ieee Conference On Computational Intelligence in Bioinformatics and Computational Biology, Cibcb 2015. DOI: 10.1109/CIBCB.2015.7300341  0.086
2018 Pawar S, Hallam SJ, Yadav VG. Metagenomic discovery of a novel transaminase for valorization of monoaromatic compounds Rsc Advances. 8: 22490-22497. DOI: 10.1039/C8RA02764A  0.086
2019 Rahfeld P, Sim L, Moon H, Constantinescu I, Morgan-Lang C, Hallam SJ, Kizhakkedathu JN, Withers SG. An enzymatic pathway in the human gut microbiome that converts A to universal O type blood. Nature Microbiology. PMID 31182795 DOI: 10.1038/S41564-019-0469-7  0.085
2016 Chen HM, Armstrong Z, Hallam SJ, Withers SG. Synthesis and evaluation of a series of 6-chloro-4-methylumbelliferyl glycosides as fluorogenic reagents for screening metagenomic libraries for glycosidase activity. Carbohydrate Research. 421: 33-39. PMID 26774876 DOI: 10.1016/J.Carres.2015.12.010  0.083
2008 Hallam S, MacDonald R. The effects of music in community and educational settings The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0044  0.082
2019 Torres-Beltrán M, Hawley AK, Capelle D, Zaikova E, Walsh DA, Mueller A, Scofield M, Payne C, Pakhomova L, Kheirandish S, Finke J, Bhatia M, Shevchuk O, Gies EA, Fairley D, ... ... Hallam SJ, et al. Author Correction: A compendium of geochemical information from the Saanich Inlet water column. Scientific Data. 6: 1. PMID 30647409 DOI: 10.1038/S41597-018-0005-2  0.081
2019 Rahfeld P, Wardman JF, Mehr K, Huff D, Morgan-Lang C, Chen HM, Hallam SJ, Withers SG. Prospecting for α-N-acetylgalactosaminidases yields a new class of GH31 O-glycanase. The Journal of Biological Chemistry. PMID 31530641 DOI: 10.1074/Jbc.Ra119.010628  0.08
2011 Hallam SL, Mzilikazi N. Heterothermy in the southern African hedgehog, Atelerix frontalis. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 181: 437-45. PMID 21082184 DOI: 10.1007/s00360-010-0531-5  0.078
2018 Koma T, Veljkovic V, Anderson DE, Wang LF, Rossi SL, Shan C, Shi PY, Beasley DW, Bukreyeva N, Smith JN, Hallam S, Huang C, von Messling V, Paessler S. Zika virus infection elicits auto-antibodies to C1q. Scientific Reports. 8: 1882. PMID 29382894 DOI: 10.1038/S41598-018-20185-8  0.077
2015 Koma T, Patterson M, Huang C, Seregin AV, Maharaj PD, Miller M, Smith JN, Walker AG, Hallam S, Paessler S. Machupo virus expressing GPC of the Candid#1 vaccine strain of Junin virus is highly attenuated and immunogenic. Journal of Virology. PMID 26581982 DOI: 10.1128/Jvi.02615-15  0.077
2014 Umbarger MA, Kennedy CJ, Saunders P, Breton B, Chennagiri N, Emhoff J, Greger V, Hallam S, Maganzini D, Micale C, Nizzari MM, Towne CF, Church GM, Porreca GJ. Next-generation carrier screening. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 16: 132-40. PMID 23765052 DOI: 10.1038/Gim.2013.83  0.076
2021 Koma T, Huang C, Coscia A, Hallam S, Manning JT, Maruyama J, Walker AG, Miller M, Smith JN, Patterson M, Abraham J, Paessler S. Glycoprotein N-linked glycans play a critical role in arenavirus pathogenicity. Plos Pathogens. 17: e1009356. PMID 33647064 DOI: 10.1371/journal.ppat.1009356  0.076
2021 Dill-McFarland KA, König SG, Mazel F, Oliver DC, McEwen LM, Hong KY, Hallam SJ. An integrated, modular approach to data science education in microbiology. Plos Computational Biology. 17: e1008661. PMID 33630850 DOI: 10.1371/journal.pcbi.1008661  0.074
2015 Waring MJ, Bennett SNL, Campbell L, Hallam S, Martin NG, Tickner C. A safe and scalable synthesis of 2-hydroxy-3-alkoxypropionates by epoxide ring opening Tetrahedron Letters. 56: 4904-4907. DOI: 10.1016/J.Tetlet.2015.06.080  0.073
2021 Zhang H, Perez-Garcia P, Dierkes RF, Applegate V, Schumacher J, Chibani CM, Sternagel S, Preuss L, Weigert S, Schmeisser C, Danso D, Pleiss J, Almeida A, Höcker B, Hallam SJ, et al. The Bacteroidetes sp. and Produce Promiscuous Esterases With PET-Hydrolyzing Activity. Frontiers in Microbiology. 12: 803896. PMID 35069509 DOI: 10.3389/fmicb.2021.803896  0.068
2000 McDonald JE, Miller FJ, Hallam SE, Nelson L, Marchuk DA, Ward KJ. Clinical manifestations in a large hereditary hemorrhagic telangiectasia (HHT) type 2 kindred. American Journal of Medical Genetics. 93: 320-7. PMID 10946360 DOI: 10.1002/1096-8628(20000814)93:4<320::AID-AJMG12>3.0.CO;2-R  0.067
2023 Koch M, Noonan AJC, Qiu Y, Dofher K, Kieft B, Mottahedeh S, Shastri M, Hallam SJ. Corrigendum: The survivor strain: Isolation and characterization of AB48, a filamentous phototactic cyanobacterium with biotechnological potential. Frontiers in Bioengineering and Biotechnology. 11: 1160235. PMID 36998808 DOI: 10.3389/fbioe.2023.1160235  0.065
2018 Hallam HJ, Hallam S, Rodriguez SE, Barrett ADT, Beasley DWC, Chua A, Ksiazek TG, Milligan GN, Sathiyamoorthy V, Reece LM. Baseline mapping of Lassa fever virology, epidemiology and vaccine research and development. Npj Vaccines. 3: 11. PMID 29581897 DOI: 10.1038/s41541-018-0049-5  0.065
2000 Hallam S, Singer E, Waring D, Jin Y. The C. elegans NeuroD homolog cnd-1 functions in multiple aspects of motor neuron fate specification. Development (Cambridge, England). 127: 4239-52. PMID 10976055  0.063
2009 Hallam S, Escorcio-Correia M, Soper R, Schultheiss A, Hagemann T. Activated macrophages in the tumour microenvironment-dancing to the tune of TLR and NF-kappaB. The Journal of Pathology. 219: 143-52. PMID 19662665 DOI: 10.1002/path.2602  0.063
2013 Durno WE, Hanson NW, Konwar KM, Hallam SJ. Expanding the boundaries of local similarity analysis. Bmc Genomics. 14: S3. PMID 23368516 DOI: 10.1186/1471-2164-14-S1-S3  0.059
1994 Sagayadan GE, Wiernik PH, Sun N, Ahearn G, Thompson D, Hallam SJ, Hu XP, Dutcher JP, Gallagher RE. Effect of retinoic acid and interferon alpha on granulocyte-macrophage colony forming cells in chronic myeloid leukemia: Increased inhibition by all-trans- and 13-cis-retinoic acids in advanced stage disease Leukemia Research. 18: 741-748. PMID 7934131 DOI: 10.1016/0145-2126(94)90055-8  0.059
1993 Wadler S, Mao X, Bajaj R, Hallam S, Schwartz EL. N-(phosphonacetyl)-L-aspartate synergistically enhances the cytotoxicity of 5-fluorouracil/interferon-alpha-2a against human colon cancer cell lines. Molecular Pharmacology. 44: 1070-6. PMID 8246910  0.057
2018 Torres-Beltrán M, Sehein T, Pachiadaki MG, Hallam SJ, Edgcomb V. Protistan parasites along oxygen gradients in a seasonally anoxic fjord: A network approach to assessing potential host-parasite interactions Deep Sea Research Part Ii: Topical Studies in Oceanography. 156: 97-110. DOI: 10.1016/j.dsr2.2017.12.026  0.056
2000 Banks RE, Forbes MA, Patel PM, Storr M, Hallam S, Clarke D, Novick D, Ingham E, Bowmer C, Southgate J, Trejdosiewicz LK, Illingworth J, Perren TJ, Selby PJ. Subcutaneous administration of recombinant glycosylated interleukin 6 in patients with cancer: pharmacokinetics, pharmacodynamics and immunomodulatory effects. Cytokine. 12: 388-96. PMID 10805221 DOI: 10.1006/cyto.1999.0556  0.055
2015 Tanner A, Hallam SJ, Nielsen SJ, Cuadra GI, Berges BK. Development of human B cells and antibodies following human hematopoietic stem cell transplantation to Rag2(-/-)γc(-/-) mice. Transplant Immunology. 32: 144-50. PMID 25843523 DOI: 10.1016/J.Trim.2015.03.002  0.053
2005 Schellenberg EG, Hallam S. Music listening and cognitive abilities in 10- and 11-year-olds: the blur effect. Annals of the New York Academy of Sciences. 1060: 202-9. PMID 16597767 DOI: 10.1196/Annals.1360.013  0.052
1998 Zhou DC, Hallam SJ, Lee SJ, Klein RS, Wiernik PH, Tallman MS, Gallagher RE. Constitutive expression of cellular retinoic acid binding protein II and lack of correlation with sensitivity to all-trans retinoic acid in acute promyelocytic leukemia cells. Cancer Research. 58: 5770-6. PMID 9865735  0.044
2013 Spencer C, Orr D, Hallam S, Tillmanns E. Daily bathing with octenidine on an intensive care unit is associated with a lower carriage rate of meticillin-resistant Staphylococcus aureus. The Journal of Hospital Infection. 83: 156-9. PMID 23201399 DOI: 10.1016/j.jhin.2012.10.007  0.044
2020 Perez SEI, Hahn AS, Krzywinski M, Hallam SJ. Hive Panel Explorer: an interactive network visualization tool. Bioinformatics (Oxford, England). PMID 32717050 DOI: 10.1093/bioinformatics/btaa683  0.044
2010 Clear AJ, Lee AM, Calaminici M, Ramsay AG, Morris KJ, Hallam S, Kelly G, Macdougall F, Lister TA, Gribben JG. Increased angiogenic sprouting in poor prognosis FL is associated with elevated numbers of CD163+ macrophages within the immediate sprouting microenvironment. Blood. 115: 5053-6. PMID 20375314 DOI: 10.1182/blood-2009-11-253260  0.042
2019 Johnson WM, Longnecker K, Kido Soule MC, Arnold WA, Bhatia MP, Hallam SJ, Van Mooy BAS, Kujawinski EB. Metabolite composition of sinking particles differs from surface suspended particles across a latitudinal transect in the South Atlantic Limnology and Oceanography. 65: 111-127. DOI: 10.1002/Lno.11255  0.04
2008 Hallam S. Editorial Psychology of Music. 36: 5. DOI: 10.1177/0305735607087446  0.04
2003 Hallam S, Ireson J. Secondary school teachers' attitudes towards and beliefs about ability grouping. The British Journal of Educational Psychology. 73: 343-56. PMID 14672148  0.039
2010 Kotsopoulou A, Hallam S. The perceived impact of playing music while studying: Age and cultural differences Educational Studies. 36: 431-440. DOI: 10.1080/03055690903424774  0.039
2012 Hallam S. On the record: Shaun Hallam. Interview by Dan Parton. Mental Health Today (Brighton, England). 31. PMID 22690500  0.039
2013 McQueen H, Hallam S, Creech A, Varvarigou M. A philosophical perspective on leading music activities for the over 50s International Journal of Lifelong Education. 32: 353-377. DOI: 10.1080/02601370.2012.738432  0.038
2014 Parsons S, Hallam S. The impact of streaming on attainment at age seven: evidence from the Millennium Cohort Study Oxford Review of Education. 40: 567-589. DOI: 10.1080/03054985.2014.959911  0.038
2001 Ireson J, Hallam S, Plewis I. Ability grouping in secondary schools: effects on pupils' self-concepts. The British Journal of Educational Psychology. 71: 315-26. PMID 11449939  0.037
2013 Varvarigou M, Hallam S, Creech A, McQueen H. Different ways of experiencing music-making in later life: Creative music sessions for older learners in East London Research Studies in Music Education. 35: 103-118. DOI: 10.1177/1321103X13478863  0.037
2014 Creech A, Varvarigou M, Hallam S, McQueen H, Gaunt H. Scaffolding, organizational structure and interpersonal interaction in musical activities with older people Psychology of Music. 42: 430-447. DOI: 10.1177/0305735613478313  0.036
2009 Popat R, Oakervee H, Williams C, Cook M, Craddock C, Basu S, Singer C, Harding S, Foot N, Hallam S, Odeh L, Joel S, Cavenagh J. Bortezomib, low-dose intravenous melphalan, and dexamethasone for patients with relapsed multiple myeloma. British Journal of Haematology. 144: 887-94. PMID 19183191 DOI: 10.1111/j.1365-2141.2008.07572.x  0.036
2016 Hallam S, Arnot D. South-west Scotland to West Bengal: Where does patient expectation fall? British Journal of General Practice. 66: 35. DOI: 10.3399/bjgp16X683209  0.036
2015 Hallam S, Creech A, McQueen H. What impact does teaching music informally in the classroom have on teachers, and their pedagogy? Music Education Research. 1-18. DOI: 10.1080/14613808.2015.1122749  0.035
2013 Creech A, Hallam S, Varvarigou M, McQueen H, Gaunt H. Active music making: a route to enhanced subjective well-being among older people. Perspectives in Public Health. 133: 36-43. PMID 23308006 DOI: 10.1177/1757913912466950  0.033
2012 Long M, Hallam S, Creech A, Gaunt H, Robertson L. Do prior experience, gender, or level of study influence music students' perspectives on master classes? Psychology of Music. 40: 683-699. DOI: 10.1177/0305735610394709  0.032
2012 Long M, Creech A, Gaunt H, Hallam S, Robertson L. Blast from the past: Conservatoire students' experiences and perceptions of public master classes Musicae Scientiae. 16: 286-306. DOI: 10.1177/1029864912458848  0.032
2007 Papageorgi I, Hallam S, Welch GF. A conceptual framework for understanding musical performance anxiety Research Studies in Music Education. 28: 83-107. DOI: 10.1177/1321103X070280010207  0.032
2011 Hallam S. Culture, musicality, and musical expertise A Cultural Psychology of Music Education. DOI: 10.1093/acprof:oso/9780199214389.003.0009  0.032
2008 Popat R, Oakervee HE, Hallam S, Curry N, Odeh L, Foot N, Esseltine DL, Drake M, Morris C, Cavenagh JD. Bortezomib, doxorubicin and dexamethasone (PAD) front-line treatment of multiple myeloma: updated results after long-term follow-up. British Journal of Haematology. 141: 512-6. PMID 18371113 DOI: 10.1111/j.1365-2141.2008.06997.x  0.032
2010 Rogers L, Hallam S. Changes in perceptions of studying for the GCSE among year 10 and year 11 pupils Educational Studies. 36: 153-163. DOI: 10.1080/03055690903148746  0.031
2013 Hallam S. What predicts level of expertise attained, quality of performance, and future musical aspirations in young instrumental players? Psychology of Music. 41: 267-291. DOI: 10.1177/0305735611425902  0.03
2012 Hallam S, Campbell EP, Qazamel M, Owen H, Ellis AD. Effects of traditional versus novel feeding management on 24 hour time budget of stabled horses Eaap Scientific Series. 132: 319-322.  0.029
2014 Creech A, Hallam S, Varvarigou M, Gaunt H, McQueen H, Pincas A. The role of musical possible selves in supporting subjective well-being in later life Music Education Research. 16: 32-49. DOI: 10.1080/14613808.2013.788143  0.029
2019 Capelle DW, Hallam SJ, Tortell PD. Time-series CH4 measurements from Saanich Inlet, BC, a seasonally anoxic fjord Marine Chemistry. 215: 103664. DOI: 10.1016/J.MARCHEM.2019.103664  0.028
2013 Hallam S, Parsons S. The incidence and make up of ability grouped sets in the UK primary school Research Papers in Education. 28: 393-420. DOI: 10.1080/02671522.2012.729079  0.028
1998 Esplin MS, Hallam S, Farrington PF, Nelson L, Byrne J, Ward K. Myotonic dystrophy is a significant cause of idiopathic polyhydramnios. American Journal of Obstetrics and Gynecology. 179: 974-7. PMID 9790382  0.028
2005 Ireson J, Hallam S. Pupils' liking for school: ability grouping, self-concept and perceptions of teaching. The British Journal of Educational Psychology. 75: 297-311. PMID 16033668 DOI: 10.1348/000709904X24762  0.028
2015 Chaudhry A, Hallam S, Chambers A, Sahu AK, Govindarajulu S, Cawthorn S. Improving postoperative pain management in subpectoral tissue expander implant reconstruction of the breast using an elastomeric pump. Annals of the Royal College of Surgeons of England. 97: 364-8. PMID 26264088 DOI: 10.1308/003588415X14181254789484  0.027
2008 McPherson G, Hallam S. Musical potential The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0024  0.027
2010 Hallam S, Montoto S. Follicular lymphoma: managing an indolent malignancy. British Journal of Hospital Medicine (London, England : 2005). 71: 258-62. PMID 20448493 DOI: 10.12968/hmed.2010.71.5.47905  0.026
2015 Hallam S, Govindarajulu S, Huckett B, Bahl A. BRCA1/2 Mutation-associated Breast Cancer, Wide Local Excision and Radiotherapy or Unilateral Mastectomy: A Systematic Review. Clinical Oncology (Royal College of Radiologists (Great Britain)). 27: 527-35. PMID 26113392 DOI: 10.1016/j.clon.2015.06.001  0.026
2012 Gaunt H, Creech A, Long M, Hallam S. Supporting conservatoire students towards professional integration: One-to-one tuition and the potential of mentoring Music Education Research. 14: 25-43. DOI: 10.1080/14613808.2012.657166  0.025
2015 Bagley C, Hallam S. Managed moves: school and local authority staff perceptions of processes, success and challenges Emotional and Behavioural Difficulties. DOI: 10.1080/13632752.2015.1053700  0.025
2009 Rogers L, Hallam S, Shaw J, Rhamie J. The integration of an alternative curriculum: Skill force British Journal of Special Education. 36: 131-139. DOI: 10.1111/j.1467-8578.2009.00436.x  0.025
2012 Varvarigou M, Creech A, Hallam S. Benefits of continuing professional development (CPD) programmes in music for KS2 (primary) teachers through the example of the London Symphony Orchestra (LSO) on Track programme Music Education Research. 14: 149-169. DOI: 10.1080/14613808.2012.685457  0.024
2015 Hallam S, Creech A, McQueen H. Teachers’ perceptions of the impact on students of the Musical Futures approach Music Education Research. DOI: 10.1080/14613808.2015.1108299  0.023
2013 Hallam S, Macdonald R. Introduction: Perspectives on the power of music Research Studies in Music Education. 35: 83-86. DOI: 10.1177/1321103X13488485  0.023
2010 Hallam S. 21st century conceptions of musical ability Psychology of Music. 38: 308-330. DOI: 10.1177/0305735609351922  0.022
2011 Taylor A, Hallam S. From leisure to work: Amateur musicians taking up instrumental or vocal teaching as a second career Music Education Research. 13: 307-325. DOI: 10.1080/14613808.2011.603044  0.022
2010 Mainwaring D, Hallam S. 'Possible selves' of young people in a mainstream secondary school and a pupil referral unit: A comparison Emotional and Behavioural Difficulties. 15: 153-169. DOI: 10.1080/13632752.2010.480889  0.021
2010 Creech A, Hallam S. Interpersonal interaction within the violin teaching studio: The influence of interpersonal dynamics on outcomes for teachers Psychology of Music. 38: 403-421. DOI: 10.1177/0305735609351913  0.021
2009 Hallam S, Gribben JG. Transplantation in chronic lymphocytic leukemia: timing and expectations. Clinical Lymphoma & Myeloma. 9: S186-93. PMID 19778839 DOI: 10.3816/CLM.2009.s.010  0.021
2008 Mathieson I, Curran S, Hallam S, Corne J. Improving gait performance in Parkinson's disease: a case report suggesting a role for footwear modifications Physiotherapy. 94: 85-88. DOI: 10.1016/j.physio.2007.04.009  0.02
2011 Kokotsaki D, Hallam S. The perceived benefits of participative music making for non-music university students: A comparison with music students Music Education Research. 13: 149-172. DOI: 10.1080/14613808.2011.577768  0.02
2013 Hallam S, Provan D, Newland AC. Immune thrombocytopenia -- what are the new treatment options? Expert Opinion On Biological Therapy. 13: 1173-85. PMID 23682685 DOI: 10.1517/14712598.2013.801451  0.02
2009 Creech A, Hallam S. Interaction in instrumental learning: the influence of interpersonal dynamics on parents International Journal of Music Education. 27: 94-106. DOI: 10.1177/0255761409102318  0.02
2013 Creech A, Hallam S, McQueen H, Varvarigou M. The power of music in the lives of older adults Research Studies in Music Education. 35: 87-102. DOI: 10.1177/1321103X13478862  0.019
2008 Hallam S, Ireson J. Subject domain differences in secondary school teachers' attitudes towards grouping pupils by ability Zbornik Instituta Za Pedagoska Istrazivanja. 40: 369-387. DOI: 10.2298/ZIPI0802369H  0.019
2012 Hallam S. Extending myeloma survival: targeting the seed and the soil. British Journal of Nursing (Mark Allen Publishing). 21: S16-7. PMID 22875263 DOI: 10.12968/bjon.2012.21.Sup10.S16  0.019
2005 Cronister A, DiMaio M, Mahoney MJ, Donnenfeld AE, Hallam S. Fragile X syndrome carrier screening in the prenatal genetic counseling setting. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 7: 246-50. PMID 15834242 DOI: 10.1097/01.GIM.0000159898.90221.D3  0.018
2012 Marín C, Pérez Echeverría MP, Hallam S. Using the musical score to perform: A study with Spanish flute students British Journal of Music Education. 29: 193-212. DOI: 10.1017/S0265051712000046  0.018
2013 Hallam S, Aggarwal A, Predolac D, Cunnick G, Ashford R. Primary ectopic breast carcinoma in a supernumerary breast arising in the anterior chest wall: a case report and review of the literature. Journal of Surgical Case Reports. 2013. PMID 24968437 DOI: 10.1093/jscr/rjt107  0.018
2010 Hallam S, Rogers L, Rhamie J. Staff perceptions of the success of an alternative curriculum: Skill Force Emotional and Behavioural Difficulties. 15: 63-74. DOI: 10.1080/13632750903512431  0.018
2000 Adams J, Carder PJ, Downey S, Forbes MA, MacLennan K, Allgar V, Kaufman S, Hallam S, Bicknell R, Walker JJ, Cairnduff F, Selby PJ, Perren TJ, Lansdown M, Banks RE. Vascular endothelial growth factor (VEGF) in breast cancer: comparison of plasma, serum, and tissue VEGF and microvessel density and effects of tamoxifen. Cancer Research. 60: 2898-905. PMID 10850435  0.017
2008 Hallam S, Rogers L, Creech A. Gender differences in musical instrument choice International Journal of Music Education. 26: 7-19. DOI: 10.1177/0255761407085646  0.017
2010 Rogers L, Hallam S. Gender differences in perceptions of studying for the GCSE International Journal of Inclusive Education. 14: 795-811. DOI: 10.1080/13603110902721654  0.016
2012 Blatchford P, Hallam S, Ireson J, Kutnick P, Creech A. Classes, groups and transitions: Structures for teaching and learning The Cambridge Primary Review Research Surveys. 548-588. DOI: 10.4324/9780203121672  0.015
2014 Varvarigou M, Creech A, Hallam S. Partnership working and possible selves in music education International Journal of Music Education. 32: 84-97. DOI: 10.1177/0255761413491060  0.014
2013 Hallam S, Parsons S. Prevalence of streaming in UK primary schools: Evidence from the Millennium Cohort Study British Educational Research Journal. 39: 514-544. DOI: 10.1080/01411926.2012.659721  0.014
2012 Hallam S, Hagemann T. TAM: A moving clinical target Tumour-Associated Macrophages. 2147483647: 63-73. DOI: 10.1007/978-1-4614-0662-4_5  0.013
2008 Hallam S, Rogers L, Ireson J. Ability grouping in the secondary school: Attitudes of teachers of practically based subjects International Journal of Research and Method in Education. 31: 181-192. DOI: 10.1080/17437270802124657  0.013
2011 Creech A, Hallam S. Learning a musical instrument: The influence of interpersonal interaction on outcomes for school-aged pupils Psychology of Music. 39: 102-122. DOI: 10.1177/0305735610370222  0.011
2015 White W, Blunden M, McAdoo SP, Sheaff M, Hallam S, McCafferty K. Immunodeficiency-associated renal Burkitt lymphoma. British Journal of Haematology. 168: 769. PMID 25441761 DOI: 10.1111/bjh.13246  0.01
2015 Bagley C, Hallam S. Young people’s and parent’s perceptions of managed moves Emotional and Behavioural Difficulties. DOI: 10.1080/13632752.2015.1081373  0.01
2015 Hallam S, Govindarajulu S, Huckett R, Bahl A. Breast-conserving Therapy and the Risk of Second Primaries in BRCA1/2 Mutation Carriers Clinical Oncology. DOI: 10.1016/j.clon.2015.11.012  0.01
2014 Long M, Creech A, Gaunt H, Hallam S. Conservatoire students' experiences and perceptions of instrumentspecific master classes Music Education Research. 16: 176-192. DOI: 10.1080/14613808.2013.859659  0.01
2013 Rytsareva I, Kalyanaraman A, Konwar K, Hallam SJ. Scalable heuristics for clustering biological graphs 2013 Ieee 3rd International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2013. DOI: 10.1109/ICCABS.2013.6629214  0.01
2013 Hallam S. Levels of expertise and musical aspirations in young instrumental players Developing the Musician: Contemporary Perspectives On Teaching and Learning. 119-132.  0.01
2012 Hallam S, Rinta T, Varvarigou M, Creech A, Papageorgi I, Gomes T, Lanipekun J. The development of practising strategies in young people Psychology of Music. 40: 652-680. DOI: 10.1177/0305735612443868  0.01
2012 Hallam S. The Effects of Background Music on Health and Wellbeing Music, Health, and Wellbeing. DOI: 10.1093/acprof:oso/9780199586974.003.0032  0.01
2012 Hallam S. Musicality The Child as Musician: a Handbook of Musical Development. DOI: 10.1093/acprof:oso/9780198530329.003.0005  0.01
2011 Guettler K, Hallam S. String Instruments The Science & Psychology of Music Performance: Creative Strategies For Teaching and Learning. DOI: 10.1093/acprof:oso/9780195138108.003.0019  0.01
2011 Barry NH, Hallam S. Practice The Science & Psychology of Music Performance: Creative Strategies For Teaching and Learning. DOI: 10.1093/acprof:oso/9780195138108.003.0010  0.01
2011 Hallam S, Gribben JG. The Role of Stem-Cell Transplantation in Chronic Lymphocytic Leukemia Leukemias: Principles and Practice of Therapy. 315-326. DOI: 10.1002/9781444327359.ch26  0.01
2010 Hallam S, Gribben JG. Stem cell transplantation in chronic lymphocytic leukaemia - steering a safe course over shifting sands. Best Practice & Research. Clinical Haematology. 23: 109-19. PMID 20620975 DOI: 10.1016/j.beha.2009.12.001  0.01
2010 Hallam S. The power of music: Its impact on the intellectual, social and personal development of children and young people International Journal of Music Education. 28: 269-289. DOI: 10.1177/0255761410370658  0.01
2010 Hallam S. Music learning International Encyclopedia of Education. 407-412. DOI: 10.1016/B978-0-08-044894-7.00520-0  0.01
2009 Hallam S, Burnard P, Robertson A, Saleh C, Davies V, Rogers L, Kokatsaki D. Trainee primary-school teachers' perceptions of their effectiveness in teaching music (Music Education Research 11, 2 (221-240)) Music Education Research. 11: 403. DOI: 10.1080/14613800903281791  0.01
2009 Hallam S. An evaluation of the Social and Emotional Aspects of Learning (SEAL) programme: Promoting positive behaviour, effective learning and well-being in primary school children Oxford Review of Education. 35: 313-330. DOI: 10.1080/03054980902934597  0.01
2009 Ireson J, Hallam S. Academic self-concepts in adolescence: Relations with achievement and ability grouping in schools Learning and Instruction. 19: 201-213. DOI: 10.1016/j.learninstruc.2008.04.001  0.01
2009 Hallam S. The role of psychology in music education Psychologist. 22: 1016-1017.  0.01
2008 Cronister A, Teicher J, Rohlfs EM, Donnenfeld A, Hallam S. Prevalence and instability of fragile X alleles: implications for offering fragile X prenatal diagnosis. Obstetrics and Gynecology. 111: 596-601. PMID 18310361 DOI: 10.1097/AOG.0b013e318163be0b  0.01
2008 Rogers L, Hallam S, Shaw J. Do generalist parenting programmes improve children's behaviour and attendance at school? the parents' perspective British Journal of Special Education. 35: 16-25. DOI: 10.1111/j.1467-8578.2008.00365.x  0.01
2008 Hallam S. Motivation to learn The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0027  0.01
2008 Gaunt H, Hallam S. Individuality in the learning of musical skills The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0026  0.01
2008 Jørgensen H, Hallam S. Practising The Oxford Handbook of Music Psychology. DOI: 10.1093/oxfordhb/9780199298457.013.0025  0.01
2008 Cross I, Hallam S, Thaut M. The Oxford Handbook of Music Psychology The Oxford Handbook of Music Psychology. 1-600. DOI: 10.1093/oxfordhb/9780199298457.001.0001  0.01
2007 Hallam S. Editorial: Psychology of Music Psychology of Music. 35: 379. DOI: 10.1177/0305735607080741  0.01
1997 Comerci JT, Hallam S, Goldberg GL, Runowicz CD, Fields AL, Wadler S, Gallagher RE. Expression of retinoic acid receptor-β2 mRNA in normal cervical epithelium and cervical squamous cell carcinoma International Journal of Oncology. 11: 983-988.  0.01
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