Yaroslav O. Halchenko - Publications

Dartmouth College, Hanover, NH, United States 
Imaging, Multimodal Analysis, PyMVPA, Category-specific Visual Processing

31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Esteban O, Ciric R, Finc K, Blair RW, Markiewicz CJ, Moodie CA, Kent JD, Goncalves M, DuPre E, Gomez DEP, Ye Z, Salo T, Valabregue R, Amlien IK, Liem F, ... ... Halchenko YO, et al. Analysis of task-based functional MRI data preprocessed with fMRIPrep. Nature Protocols. PMID 32514178 DOI: 10.1038/s41596-020-0327-3  0.92
2019 Yarkoni T, Markiewicz CJ, de la Vega A, Gorgolewski KJ, Salo T, Halchenko YO, McNamara Q, DeStasio K, Poline JB, Petrov D, Hayot-Sasson V, Nielson DM, Carlin J, Kiar G, Whitaker K, et al. PyBIDS: Python tools for BIDS datasets. Journal of Open Source Software. 4. PMID 32775955 DOI: 10.21105/joss.01294  1
2019 Kennedy DN, Abraham SA, Bates JF, Crowley A, Ghosh S, Gillespie T, Goncalves M, Grethe JS, Halchenko YO, Hanke M, Haselgrove C, Hodge SM, Jarecka D, Kaczmarzyk J, Keator DB, et al. Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging. Frontiers in Neuroinformatics. 13: 1. PMID 30792636 DOI: 10.3389/fninf.2019.00001  1
2018 Nastase SA, Halchenko YO, Connolly AC, Gobbini MI, Haxby JV. Neural Responses to Naturalistic Clips of Behaving Animals in Two Different Task Contexts. Frontiers in Neuroscience. 12: 316. PMID 29867327 DOI: 10.3389/fnins.2018.00316  1
2017 Visconti di Oleggio Castello M, Halchenko YO, Guntupalli JS, Gors JD, Gobbini MI. The neural representation of personally familiar and unfamiliar faces in the distributed system for face perception. Scientific Reports. 7: 12237. PMID 28947835 DOI: 10.1038/s41598-017-12559-1  1
2017 Nastase SA, Connolly AC, Oosterhof NN, Halchenko YO, Guntupalli JS, Visconti di Oleggio Castello M, Gors J, Gobbini MI, Haxby JV. Attention Selectively Reshapes the Geometry of Distributed Semantic Representation. Cerebral Cortex (New York, N.Y. : 1991). 1-15. PMID 28591837 DOI: 10.1093/cercor/bhx138  1
2017 Eglen SJ, Marwick B, Halchenko YO, Hanke M, Sufi S, Gleeson P, Silver RA, Davison AP, Lanyon L, Abrams M, Wachtler T, Willshaw DJ, Pouzat C, Poline JB. Toward standard practices for sharing computer code and programs in neuroscience. Nature Neuroscience. 20: 770-773. PMID 28542156 DOI: 10.1038/nn.4550  1
2016 Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, Flandin G, Ghosh SS, Glatard T, Halchenko YO, Handwerker DA, Hanke M, Keator D, Li X, Michael Z, et al. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data. 3: 160044. PMID 27326542 DOI: 10.1038/sdata.2016.44  1
2016 Connolly AC, Sha L, Guntupalli JS, Oosterhof N, Halchenko YO, Nastase SA, di Oleggio Castello MV, Abdi H, Jobst BC, Gobbini MI, Haxby JV. How the Human Brain Represents Perceived Dangerousness or "Predacity" of Animals. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 5373-84. PMID 27170133 DOI: 10.1523/JNEUROSCI.3395-15.2016  1
2016 Guntupalli JS, Hanke M, Halchenko YO, Connolly AC, Ramadge PJ, Haxby JV. A Model of Representational Spaces in Human Cortex. Cerebral Cortex (New York, N.Y. : 1991). PMID 26980615 DOI: 10.1093/cercor/bhw068  1
2015 Halchenko YO, Hanke M. Four aspects to make science open "by design" and not as an after-thought. Gigascience. 4: 31. PMID 26191404 DOI: 10.1186/s13742-015-0072-7  1
2015 Hanke M, Halchenko YO. A communication hub for a decentralized collaboration on studying real-life cognition. F1000research. 4: 62. PMID 26097689 DOI: 10.12688/f1000research.6229.1  1
2015 Sha L, Haxby JV, Abdi H, Guntupalli JS, Oosterhof NN, Halchenko YO, Connolly AC. The animacy continuum in the human ventral vision pathway. Journal of Cognitive Neuroscience. 27: 665-78. PMID 25269114 DOI: 10.1162/jocn_a_00733  1
2015 Hanke M, Halchenko YO. A communication hub for a decentralized collaboration on studying real-life cognition F1000research. 4. DOI: 10.12688/f1000research.6229.1  1
2013 Gobbini MI, Gors JD, Halchenko YO, Rogers C, Guntupalli JS, Hughes H, Cipolli C. Prioritized Detection of Personally Familiar Faces. Plos One. 8: e66620. PMID 23805248 DOI: 10.1371/journal.pone.0066620  1
2013 Gobbini MI, Gors JD, Halchenko YO, Hughes HC, Cipolli C. Processing of invisible social cues. Consciousness and Cognition. 22: 765-70. PMID 23727710 DOI: 10.1016/j.concog.2013.05.002  1
2013 Kohler PJ, Fogelson SV, Reavis EA, Meng M, Guntupalli JS, Hanke M, Halchenko YO, Connolly AC, Haxby JV, Tse PU. Pattern classification precedes region-average hemodynamic response in early visual cortex. Neuroimage. 78: 249-60. PMID 23587693 DOI: 10.1016/j.neuroimage.2013.04.019  1
2012 Halchenko YO, Hanke M. Open is Not Enough. Let's Take the Next Step: An Integrated, Community-Driven Computing Platform for Neuroscience. Frontiers in Neuroinformatics. 6: 22. PMID 23055966 DOI: 10.3389/fninf.2012.00022  1
2012 Poline JB, Breeze JL, Ghosh S, Gorgolewski K, Halchenko YO, Hanke M, Haselgrove C, Helmer KG, Keator DB, Marcus DS, Poldrack RA, Schwartz Y, Ashburner J, Kennedy DN. Data sharing in neuroimaging research. Frontiers in Neuroinformatics. 6: 9. PMID 22493576 DOI: 10.3389/fninf.2012.00009  1
2012 Connolly AC, Guntupalli JS, Gors J, Hanke M, Halchenko YO, Wu YC, Abdi H, Haxby JV. The representation of biological classes in the human brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 2608-18. PMID 22357845 DOI: 10.1523/JNEUROSCI.5547-11.2012  1
2011 Haxby JV, Guntupalli JS, Connolly AC, Halchenko YO, Conroy BR, Gobbini MI, Hanke M, Ramadge PJ. A common, high-dimensional model of the representational space in human ventral temporal cortex. Neuron. 72: 404-16. PMID 22017997 DOI: 10.1016/j.neuron.2011.08.026  1
2011 Hanke M, Halchenko YO. Neuroscience Runs on GNU/Linux. Frontiers in Neuroinformatics. 5: 8. PMID 21779243 DOI: 10.3389/fninf.2011.00008  1
2010 Hanke M, Halchenko YO, Haxby JV, Pollmann S. Statistical learning analysis in neuroscience: aiming for transparency. Frontiers in Neuroscience. 4: 38. PMID 20582270 DOI: 10.3389/neuro.01.007.2009  1
2010 Ramsey JD, Hanson SJ, Hanson C, Halchenko YO, Poldrack RA, Glymour C. Six problems for causal inference from fMRI. Neuroimage. 49: 1545-58. PMID 19747552 DOI: 10.1016/j.neuroimage.2009.08.065  1
2009 Poldrack RA, Halchenko YO, Hanson SJ. Decoding the large-scale structure of brain function by classifying mental States across individuals. Psychological Science. 20: 1364-72. PMID 19883493 DOI: 10.1111/j.1467-9280.2009.02460.x  1
2009 Hanke M, Halchenko YO, Sederberg PB, Olivetti E, Fründ I, Rieger JW, Herrmann CS, Haxby JV, Hanson SJ, Pollmann S. PyMVPA: A Unifying Approach to the Analysis of Neuroscientific Data. Frontiers in Neuroinformatics. 3: 3. PMID 19212459 DOI: 10.3389/neuro.11.003.2009  1
2009 Hanke M, Halchenko YO, Sederberg PB, Hanson SJ, Haxby JV, Pollmann S. PyMVPA: A python toolbox for multivariate pattern analysis of fMRI data. Neuroinformatics. 7: 37-53. PMID 19184561 DOI: 10.1007/s12021-008-9041-y  1
2008 Hanson SJ, Halchenko YO. Brain reading using full brain support vector machines for object recognition: there is no "face" identification area. Neural Computation. 20: 486-503. PMID 18047411 DOI: 10.1162/neco.2007.09-06-340  1
2007 Hanson SJ, Hanson C, Halchenko Y, Matsuka T, Zaimi A. Bottom-up and top-down brain functional connectivity underlying comprehension of everyday visual action. Brain Structure & Function. 212: 231-44. PMID 17968590 DOI: 10.1007/s00429-007-0160-2  1
2007 Hanson SJ, Rebecchi R, Hanson C, Halchenko YO. Dense mode clustering in brain maps. Magnetic Resonance Imaging. 25: 1249-62. PMID 17459639 DOI: 10.1016/j.mri.2007.03.013  1
2000 Timchenko LI, Kutaev YF, Gertsiy AA, Halchenko YO, Zahoruiko LV, Mansur T. Method for image coordinate definition on extended laser paths Proceedings of Spie - the International Society For Optical Engineering. 4148: 19-26.  1
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