Steven A. Farber - Publications

Carnegie Institution of Washington, Washington, DC, United States 
lipid metabolism

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Anderson JL, Mulligan TS, Shen MC, Wang H, Scahill CM, Tan FJ, Du SJ, Busch-Nentwich EM, Farber SA. mRNA processing in mutant zebrafish lines generated by chemical and CRISPR-mediated mutagenesis produces unexpected transcripts that escape nonsense-mediated decay. Plos Genetics. 13: e1007105. PMID 29161261 DOI: 10.1371/journal.pgen.1007105  0.48
2017 Otis JP, Shen MC, Quinlivan V, Anderson JL, Farber SA. 2Intestinal epithelial cell Caveolin 1 regulates fatty acid and lipoprotein cholesterol plasma levels. Disease Models & Mechanisms. PMID 28130355 DOI: 10.1242/dmm.027300  0.48
2016 Zeituni EM, Wilson MH, Zheng X, Iglesias PA, Sepanski M, Siddiqi MA, Anderson JL, Zheng Y, Farber SA. Endoplasmic reticulum lipid flux influences enterocyte nuclear morphology and lipid-dependent transcriptional responses. The Journal of Biological Chemistry. PMID 27655916 DOI: 10.1074/jbc.M116.749358  0.48
2015 Otis JP, Zeituni EM, Thierer JH, Anderson JL, Brown AC, Boehm ED, Cerchione DM, Ceasrine AM, Avraham-Davidi I, Tempelhof H, Yaniv K, Farber SA. Zebrafish as a model for apolipoprotein biology: comprehensive expression analysis and a role for ApoA-IV in regulating food intake. Disease Models & Mechanisms. 8: 295-309. PMID 25633982 DOI: 10.1242/dmm.018754  1
2015 Walters J, Anderson J, Bittman R, Pack M, Farber S. Visualization of Lipid Metabolism in the Zebrafish Intestine Reveals a Relationship between NPC1L1-Mediated Cholesterol Uptake and Dietary Fatty Acid (Chemistry & Biology 19, 913925, July 27, 2012) Chemistry and Biology. 22: 1223. DOI: 10.1016/j.chembiol.2015.09.003  1
2014 Miyares RL, de Rezende VB, Farber SA. Zebrafish yolk lipid processing: a tractable tool for the study of vertebrate lipid transport and metabolism. Disease Models & Mechanisms. 7: 915-27. PMID 24812437 DOI: 10.1242/dmm.015800  1
2013 Miyares RL, Stein C, Renisch B, Anderson JL, Hammerschmidt M, Farber SA. Long-chain Acyl-CoA synthetase 4A regulates Smad activity and dorsoventral patterning in the zebrafish embryo. Developmental Cell. 27: 635-47. PMID 24332754 DOI: 10.1016/j.devcel.2013.11.011  1
2013 Otis JP, Farber SA. Imaging vertebrate digestive function and lipid metabolism in vivo. Drug Discovery Today. Disease Models. 10. PMID 24187571 DOI: 10.1016/j.ddmod.2012.02.008  1
2013 Sadler KC, Rawls JF, Farber SA. Getting the inside tract: new frontiers in zebrafish digestive system biology. Zebrafish. 10: 129-31. PMID 23738756 DOI: 10.1089/zeb.2013.1500  1
2013 De Rose RA, Farber SA. Retraction for Smart et al., Annexin 2-caveolin 1 complex is a target of ezetimibe and regulates intestinal cholesterol transport. Proceedings of the National Academy of Sciences of the United States of America. 110: 797. PMID 23267065 DOI: 10.1073/pnas.1220320110  1
2012 Semova I, Carten JD, Stombaugh J, Mackey LC, Knight R, Farber SA, Rawls JF. Microbiota regulate intestinal absorption and metabolism of fatty acids in the zebrafish. Cell Host & Microbe. 12: 277-88. PMID 22980325 DOI: 10.1016/j.chom.2012.08.003  1
2012 Walters JW, Anderson JL, Bittman R, Pack M, Farber SA. Visualization of lipid metabolism in the zebrafish intestine reveals a relationship between NPC1L1-mediated cholesterol uptake and dietary fatty acid. Chemistry & Biology. 19: 913-25. PMID 22749558 DOI: 10.1016/j.chembiol.2012.05.018  1
2012 Delous M, Yin C, Shin D, Ninov N, Debrito Carten J, Pan L, Ma TP, Farber SA, Moens CB, Stainier DY. Sox9b is a key regulator of pancreaticobiliary ductal system development. Plos Genetics. 8: e1002754. PMID 22719264 DOI: 10.1371/journal.pgen.1002754  1
2012 Avraham-Davidi I, Ely Y, Pham VN, Castranova D, Grunspan M, Malkinson G, Gibbs-Bar L, Mayseless O, Allmog G, Lo B, Warren CM, Chen TT, Ungos J, Kidd K, Shaw K, ... ... Farber SA, et al. ApoB-containing lipoproteins regulate angiogenesis by modulating expression of VEGF receptor 1. Nature Medicine. 18: 967-73. PMID 22581286 DOI: 10.1038/nm.2759  1
2012 Farber SA, Zeituni EM. We see the light: chemical-genetic protein regulation. Chemistry & Biology. 19: 311-2. PMID 22444585 DOI: 10.1016/j.chembiol.2012.03.001  1
2011 Carten JD, Bradford MK, Farber SA. Visualizing digestive organ morphology and function using differential fatty acid metabolism in live zebrafish. Developmental Biology. 360: 276-85. PMID 21968100 DOI: 10.1016/j.ydbio.2011.09.010  1
2011 Martynov A, Farber B, Farber S. Quasi-life self-organizing systems: based on ensembles of succinylated derivatives of interferon-gamma. Current Medicinal Chemistry. 18: 3431-6. PMID 21728956 DOI: 10.2174/092986711796504574  1
2011 Mulligan T, Farber SA. Central and C-terminal domains of heterotrimeric G protein gamma subunits differentially influence the signaling necessary for primordial germ cell migration. Cellular Signalling. 23: 1617-24. PMID 21699975 DOI: 10.1016/j.cellsig.2011.05.015  1
2011 Anderson JL, Carten JD, Farber SA. Zebrafish lipid metabolism: from mediating early patterning to the metabolism of dietary fat and cholesterol. Methods in Cell Biology. 101: 111-41. PMID 21550441 DOI: 10.1016/B978-0-12-387036-0.00005-0  1
2010 Anderson JL, Macurak ML, Halpern ME, Farber SA. A versatile aquatics facility inventory system with real-time barcode scan entry. Zebrafish. 7: 281-7. PMID 20874493 DOI: 10.1089/zeb.2010.0661  1
2010 Clifton JD, Lucumi E, Myers MC, Napper A, Hama K, Farber SA, Smith AB, Huryn DM, Diamond SL, Pack M. Identification of novel inhibitors of dietary lipid absorption using zebrafish. Plos One. 5: e12386. PMID 20811635 DOI: 10.1371/journal.pone.0012386  1
2010 Mulligan T, Blaser H, Raz E, Farber SA. Prenylation-deficient G protein gamma subunits disrupt GPCR signaling in the zebrafish. Cellular Signalling. 22: 221-33. PMID 19786091 DOI: 10.1016/j.cellsig.2009.09.017  1
2009 Carten JD, Farber SA. A new model system swims into focus: using the zebrafish to visualize intestinal metabolism in vivo. Clinical Lipidology. 4: 501-515. PMID 20174460 DOI: 10.2217/clp.09.40  1
2009 Hama K, Provost E, Baranowski TC, Rubinstein AL, Anderson JL, Leach SD, Farber SA. In vivo imaging of zebrafish digestive organ function using multiple quenched fluorescent reporters. American Journal of Physiology. Gastrointestinal and Liver Physiology. 296: G445-53. PMID 19056761 DOI: 10.1152/ajpgi.90513.2008  1
2008 Farber SA. U.S. scientists' role in the eugenics movement (1907-1939): a contemporary biologist's perspective. Zebrafish. 5: 243-5. PMID 19133822 DOI: 10.1089/zeb.2008.0576  1
2008 Ouyang M, Garnett AT, Han TM, Hama K, Lee A, Deng Y, Lee N, Liu HY, Amacher SL, Farber SA, Ho SY. A web based resource characterizing the zebrafish developmental profile of over 16,000 transcripts. Gene Expression Patterns : Gep. 8: 171-80. PMID 18068546 DOI: 10.1016/j.gep.2007.10.011  1
2008 Barresi MJ, Farber SA, Hutson LD, Hyde DR, Liang JO, Morris JK. Zebrafish in the classroom Zebrafish. 5: 205-208. DOI: 10.1089/zeb.2008.0538  1
2007 Robu ME, Larson JD, Nasevicius A, Beiraghi S, Brenner C, Farber SA, Ekker SC. p53 activation by knockdown technologies. Plos Genetics. 3: e78. PMID 17530925 DOI: 10.1371/journal.pgen.0030078  1
2006 Pickart MA, Klee EW, Nielsen AL, Sivasubbu S, Mendenhall EM, Bill BR, Chen E, Eckfeldt CE, Knowlton M, Robu ME, Larson JD, Deng Y, Schimmenti LA, Ellis LB, Verfaillie CM, ... ... Farber SA, et al. Genome-wide reverse genetics framework to identify novel functions of the vertebrate secretome. Plos One. 1: e104. PMID 17218990 DOI: 10.1371/journal.pone.0000104  1
2006 Ho SY, Lorent K, Pack M, Farber SA. Zebrafish fat-free is required for intestinal lipid absorption and Golgi apparatus structure. Cell Metabolism. 3: 289-300. PMID 16581006 DOI: 10.1016/j.cmet.2006.03.001  1
2005 Mulligan TS, Farber SA. A "block and rescue" pharmacogenetic approach to dissecting a biochemical pathway controlling germ cell migration. Zebrafish. 1: 343-7. PMID 18248212 DOI: 10.1089/zeb.2005.1.343  1
2005 Duffy KT, McAleer MF, Davidson WR, Kari L, Kari C, Liu CG, Farber SA, Cheng KC, Mest JR, Wickstrom E, Dicker AP, Rodeck U. Coordinate control of cell cycle regulatory genes in zebrafish development tested by cyclin D1 knockdown with morpholino phosphorodiamidates and hydroxyprolyl-phosphono peptide nucleic acids. Nucleic Acids Research. 33: 4914-21. PMID 16284195 DOI: 10.1093/nar/gki799  1
2005 Ghiselli G, Farber SA. D-glucuronyl C5-epimerase acts in dorso-ventral axis formation in zebrafish. Bmc Developmental Biology. 5: 19. PMID 16156897 DOI: 10.1186/1471-213X-5-19  1
2005 Markova M, Koratkar RA, Silverman KA, Sollars VE, MacPhee-Pellini M, Walters R, Palazzo JP, Buchberg AM, Siracusa LD, Farber SA. Diversity in secreted PLA2-IIA activity among inbred mouse strains that are resistant or susceptible to Apc Min/+ tumorigenesis. Oncogene. 24: 6450-8. PMID 16007193 DOI: 10.1038/sj.onc.1208791  1
2005 McAleer MF, Davidson C, Davidson WR, Yentzer B, Farber SA, Rodeck U, Dicker AP. Novel use of zebrafish as a vertebrate model to screen radiation protectors and sensitizers. International Journal of Radiation Oncology, Biology, Physics. 61: 10-3. PMID 15629588 DOI: 10.1016/j.ijrobp.2004.09.046  1
2004 Wickstrom E, Urtishak KA, Choob M, Tian X, Sternheim N, Cross LM, Rubinstein A, Farber SA. Downregulation of gene expression with negatively charged peptide nucleic acids (PNAs) in zebrafish embryos. Methods in Cell Biology. 77: 137-58. PMID 15602910  1
2004 Ho SY, Thorpe JL, Deng Y, Santana E, DeRose RA, Farber SA. Lipid metabolism in zebrafish. Methods in Cell Biology. 76: 87-108. PMID 15602873 DOI: 10.1016/S0091-679X(04)76006-9  1
2004 Wickstrom E, Choob M, Urtishak KA, Tian X, Sternheim N, Talbot S, Archdeacon J, Efimov VA, Farber SA. Sequence specificity of alternating hydroyprolyl/phosphono peptide nucleic acids against zebrafish embryo mRNAs. Journal of Drug Targeting. 12: 363-72. PMID 15545086 DOI: 10.1080/10611860412331285242  1
2004 Schaefer J, Farber SA. Breaking down the stereotypes of science by recruiting young scientists. Plos Biology. 2: e279. PMID 15486571 DOI: 10.1371/journal.pbio.0020279  1
2004 Mashek DG, Bornfeldt KE, Coleman RA, Berger J, Bernlohr DA, Black P, DiRusso CC, Farber SA, Guo W, Hashimoto N, Khodiyar V, Kuypers FA, Maltais LJ, Nebert DW, Renieri A, et al. Revised nomenclature for the mammalian long-chain acyl-CoA synthetase gene family. Journal of Lipid Research. 45: 1958-61. PMID 15292367 DOI: 10.1194/jlr.E400002-JLR200  1
2004 Guo Y, Cheong N, Zhang Z, De Rose R, Deng Y, Farber SA, Fernandes-Alnemri T, Alnemri ES. Tim50, a component of the mitochondrial translocator, regulates mitochondrial integrity and cell death. The Journal of Biological Chemistry. 279: 24813-25. PMID 15044455 DOI: 10.1074/jbc.M402049200  1
2004 Smart EJ, De Rose RA, Farber SA. Annexin 2-caveolin 1 complex is a target of ezetimibe and regulates intestinal cholesterol transport. Proceedings of the National Academy of Sciences of the United States of America. 101: 3450-5. PMID 14985510 DOI: 10.1073/pnas.0400441101  1
2004 Thorpe JL, Doitsidou M, Ho SY, Raz E, Farber SA. Germ cell migration in zebrafish is dependent on HMGCoA reductase activity and prenylation. Developmental Cell. 6: 295-302. PMID 14960282 DOI: 10.1016/S1534-5807(04)00032-2  1
2003 Ho SY, Pack M, Farber SA. Analysis of small molecule metabolism in zebrafish. Methods in Enzymology. 364: 408-26. PMID 14631858 DOI: 10.1016/S0076-6879(03)64023-1  1
2003 Urtishak KA, Choob M, Tian X, Sternheim N, Talbot WS, Wickstrom E, Farber SA. Targeted gene knockdown in zebrafish using negatively charged peptide nucleic acid mimics. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 228: 405-13. PMID 14579379 DOI: 10.1002/dvdy.10394  1
2003 Farber SA, De Rose RA, Olson ES, Halpern ME. The zebrafish annexin gene family. Genome Research. 13: 1082-96. PMID 12799347 DOI: 10.1101/gr.479603  1
2001 Farber SA, Pack M, Ho SY, Johnson ID, Wagner DS, Dosch R, Mullins MC, Hendrickson HS, Hendrickson EK, Halpern ME. Genetic analysis of digestive physiology using fluorescent phospholipid reporters. Science (New York, N.Y.). 292: 1385-8. PMID 11359013 DOI: 10.1126/science.1060418  1
2000 Farber SA, Slack BE, Blusztajn JK. Acceleration of phosphatidylcholine synthesis and breakdown by inhibitors of mitochondrial function in neuronal cells: a model of the membrane defect of Alzheimer's disease. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 14: 2198-206. PMID 11053240 DOI: 10.1096/fj.99-0853  1
1999 Hendrickson HS, Hendrickson EK, Johnson ID, Farber SA. Intramolecularly quenched BODIPY-labeled phospholipid analogs in phospholipase A(2) and platelet-activating factor acetylhydrolase assays and in vivo fluorescence imaging. Analytical Biochemistry. 276: 27-35. PMID 10585741 DOI: 10.1006/abio.1999.4280  1
1999 Farber SA, Olson ES, Clark JD, Halpern ME. Characterization of Ca2+-dependent phospholipase A2 activity during zebrafish embryogenesis. The Journal of Biological Chemistry. 274: 19338-46. PMID 10383445 DOI: 10.1074/jbc.274.27.19338  1
1997 Farber SA, Bogdanov M, Marshall DL, Tehovnik EJ. Excitability of neural elements within the rat corpus striatum. Journal of Neuroscience Methods. 76: 93-104. PMID 9334944 DOI: 10.1016/S0165-0270(97)00090-3  1
1997 Müller DM, Mendla K, Farber SA, Nitsch RM. Muscarinic M1 receptor agonists increase the secretion of the amyloid precursor protein ectodomain. Life Sciences. 60: 985-91. PMID 9121365 DOI: 10.1016/S0024-3205(97)00038-6  1
1997 Farber SA, Halpern ME. Developmental regulation of zebrafish annexins and cytosolic phospholipase A2 Faseb Journal. 11: A1349.  1
1996 Farber SA, Savci V, Wei A, Slack BE, Wurtman RJ. Choline's phosphorylation in rat striatal slices is regulated by the activity of cholinergic neurons. Brain Research. 723: 90-9. PMID 8813385 DOI: 10.1016/0006-8993(96)00221-1  1
1995 Farber SA, Nitsch RM, Schulz JG, Wurtman RJ. Regulated secretion of beta-amyloid precursor protein in rat brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 15: 7442-51. PMID 7472496  1
1994 Nitsch RM, Slack BE, Farber SA, Schulz JG, Deng M, Kim C, Borghesani PR, Korver W, Wurtman RJ, Growdon JH. Regulation of proteolytic processing of the amyloid beta-protein precursor of Alzheimer's disease in transfected cell lines and in brain slices. Journal of Neural Transmission. Supplementum. 44: 21-7. PMID 7897393 DOI: 10.1007/978-3-7091-9350-1_2  1
1993 Nitsch RM, Farber SA, Growdon JH, Wurtman RJ. Release of amyloid beta-protein precursor derivatives by electrical depolarization of rat hippocampal slices. Proceedings of the National Academy of Sciences of the United States of America. 90: 5191-3. PMID 8506366 DOI: 10.1073/PNAS.90.11.5191  1
1993 Farber SA, Kischka U, Marshall DL, Wurtman RJ. Potentiation by choline of basal and electrically evoked acetylcholine release, as studied using a novel device which both stimulates and perfuses rat corpus striatum. Brain Research. 607: 177-84. PMID 8481795 DOI: 10.1016/0006-8993(93)91504-L  1
1993 Nitsch RM, Slack BE, Farber SA, Borghesani PR, Schulz JG, Kim C, Felder CC, Growdon JH, Wurtman RJ. Receptor-coupled amyloid precursor protein processing. Annals of the New York Academy of Sciences. 695: 122-7. PMID 8239269 DOI: 10.1111/j.1749-6632.1993.tb23039.x  1
1993 Kischka U, Farber SA, Marshall D, Wurtman RJ. Carbachol and naloxone synergistically elevate dopamine release in rat striatum: an in vivo microdialysis study. Brain Research. 613: 288-90. PMID 8186978 DOI: 10.1016/0006-8993(93)90912-7  1
1991 Farber SA, Buyukuysal RL, Wurtman RJ. Why do phospholipid levels decrease with repeated stimulation? A study of choline-containing compounds in rat striatum following electrical stimulation. Annals of the New York Academy of Sciences. 640: 114-7. PMID 1776728 DOI: 10.1111/j.1749-6632.1991.tb00201.x  1
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