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Engin Özkan - Publications

Affiliations: 
2014- Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
Area:
Structural biology, Cell surface receptors, Molecular neurobiology, Ubiquitination
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14/47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Priest JM, Nichols EL, Smock RG, Hopkins JB, Mendoza JL, Meijers R, Shen K, Özkan E. Structural insights into the formation of repulsive netrin guidance complexes. Science Advances. 10: eadj8083. PMID 38363837 DOI: 10.1126/sciadv.adj8083  0.547
2017 Li H, Watson A, Olechwier A, Anaya M, Sorooshyari SK, Harnett DP, Lee HP, Vielmetter J, Fares MA, Garcia KC, Özkan E, Labrador JP, Zinn K. Deconstruction of the Beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Elife. 6. PMID 28829740 DOI: 10.7554/Elife.28111  0.425
2017 Li H, Watson A, Olechwier A, Anaya M, Sorooshyari SK, Harnett DP, Lee H(, Vielmetter J, Fares MA, Garcia KC, Özkan E, Labrador J, Zinn K. Author response: Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development Elife. DOI: 10.7554/Elife.28111.016  0.359
2015 Carrillo RA, Özkan E, Menon KP, Nagarkar-Jaiswal S, Lee PT, Jeon M, Birnbaum ME, Bellen HJ, Garcia KC, Zinn K. Control of Synaptic Connectivity by a Network of Drosophila IgSF Cell Surface Proteins. Cell. 163: 1770-82. PMID 26687361 DOI: 10.1016/J.Cell.2015.11.022  0.619
2015 Ho CC, Guo N, Sockolosky JT, Ring AM, Weiskopf K, Özkan E, Mori Y, Weissman IL, Garcia KC. "Velcro" engineering of high affinity CD47 ectodomain as signal regulatory protein α (SIRPα) antagonists that enhance antibody-dependent cellular phagocytosis. The Journal of Biological Chemistry. 290: 12650-63. PMID 25837251 DOI: 10.1074/Jbc.M115.648220  0.627
2014 Birnbaum ME, Mendoza JL, Sethi DK, Dong S, Glanville J, Dobbins J, Ozkan E, Davis MM, Wucherpfennig KW, Garcia KC. Deconstructing the peptide-MHC specificity of T cell recognition. Cell. 157: 1073-87. PMID 24855945 DOI: 10.1016/J.Cell.2014.03.047  0.614
2014 Özkan E, Chia PH, Wang RR, Goriatcheva N, Borek D, Otwinowski Z, Walz T, Shen K, Garcia KC. Extracellular architecture of the SYG-1/SYG-2 adhesion complex instructs synaptogenesis. Cell. 156: 482-94. PMID 24485456 DOI: 10.1016/J.Cell.2014.01.004  0.405
2013 Weiskopf K, Ring AM, Ho CC, Volkmer JP, Levin AM, Volkmer AK, Ozkan E, Fernhoff NB, van de Rijn M, Weissman IL, Garcia KC. Engineered SIRPα variants as immunotherapeutic adjuvants to anticancer antibodies. Science (New York, N.Y.). 341: 88-91. PMID 23722425 DOI: 10.1126/Science.1238856  0.625
2013 Yu XM, Gutman I, Mosca TJ, Iram T, Ozkan E, Garcia KC, Luo L, Schuldiner O. Plum, an immunoglobulin superfamily protein, regulates axon pruning by facilitating TGF-β signaling. Neuron. 78: 456-68. PMID 23664613 DOI: 10.1016/J.Neuron.2013.03.004  0.383
2012 Ring AM, Lin JX, Feng D, Mitra S, Rickert M, Bowman GR, Pande VS, Li P, Moraga I, Spolski R, Ozkan E, Leonard WJ, Garcia KC. Mechanistic and structural insight into the functional dichotomy between IL-2 and IL-15. Nature Immunology. 13: 1187-95. PMID 23104097 DOI: 10.1038/Ni.2449  0.566
2010 Feng D, Kim T, Ozkan E, Light M, Torkin R, Teng KK, Hempstead BL, Garcia KC. Molecular and structural insight into proNGF engagement of p75NTR and sortilin. Journal of Molecular Biology. 396: 967-84. PMID 20036257 DOI: 10.1016/J.Jmb.2009.12.030  0.427
2009 Eroglu C, Allen NJ, Susman MW, O'Rourke NA, Park CY, Ozkan E, Chakraborty C, Mulinyawe SB, Annis DS, Huberman AD, Green EM, Lawler J, Dolmetsch R, Garcia KC, Smith SJ, et al. Gabapentin receptor alpha2delta-1 is a neuronal thrombospondin receptor responsible for excitatory CNS synaptogenesis. Cell. 139: 380-92. PMID 19818485 DOI: 10.1016/J.Cell.2009.09.025  0.421
2005 Ozkan E, Yu H, Deisenhofer J. Mechanistic insight into the allosteric activation of a ubiquitin-conjugating enzyme by RING-type ubiquitin ligases. Proceedings of the National Academy of Sciences of the United States of America. 102: 18890-5. PMID 16365295 DOI: 10.1073/Pnas.0509418102  0.425
2001 Usher KC, Ozkan E, Gardner KH, Deisenhofer J. The plug domain of FepA, a TonB-dependent transport protein from Escherichia coli, binds its siderophore in the absence of the transmembrane barrel domain. Proceedings of the National Academy of Sciences of the United States of America. 98: 10676-81. PMID 11526207 DOI: 10.1073/Pnas.181353398  0.44
Low-probability matches (unlikely to be authored by this person)
2019 Cheng S, Ashley J, Kurleto JD, Lobb-Rabe M, Park YJ, Carrillo RA, Özkan E. Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in . Elife. 8. PMID 30688651 DOI: 10.7554/Elife.41028  0.286
2016 Cheng S, Seven AB, Wang J, Skiniotis G, Özkan E. Conformational Plasticity in the Transsynaptic Neurexin-Cerebellin-Glutamate Receptor Adhesion Complex. Structure (London, England : 1993). 24: 2163-2173. PMID 27926833 DOI: 10.1016/J.Str.2016.11.004  0.275
2019 Ranaivoson FM, Turk LS, Ozgul S, Kakehi S, von Daake S, Lopez N, Trobiani L, De Jaco A, Denissova N, Demeler B, Özkan E, Montelione GT, Comoletti D. A Proteomic Screen of Neuronal Cell-Surface Molecules Reveals IgLONs as Structurally Conserved Interaction Modules at the Synapse. Structure (London, England : 1993). PMID 30956130 DOI: 10.1016/J.Str.2019.03.004  0.262
2019 Cheng S, Park Y, Kurleto JD, Jeon M, Zinn K, Thornton JW, Özkan E. Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence. Proceedings of the National Academy of Sciences of the United States of America. PMID 31043568 DOI: 10.1073/Pnas.1818631116  0.243
2024 Lobb-Rabe M, Nawrocka WI, Zhang R, Ashley J, Carrillo RA, Özkan E. Neuronal wiring receptors Dprs and DIPs are GPI anchored and this modification contributes to their cell surface organization. Eneuro. PMID 38233143 DOI: 10.1523/ENEURO.0184-23.2023  0.233
2017 Zinn K, Özkan E. Neural immunoglobulin superfamily interaction networks. Current Opinion in Neurobiology. 45: 99-105. PMID 28558267 DOI: 10.1016/j.conb.2017.05.010  0.224
2017 Sherani A, Jumper JM, Ozkan E, Sosnick TR, Roux B. Molecular Determinants of Specificity in the Dpr-DIP Interaction Network Biophysical Journal. 112: 53a. DOI: 10.1016/J.Bpj.2016.11.325  0.222
2022 Cortés E, Pak JS, Özkan E. Structure and Evolution of Neuronal Wiring Receptors and Ligands. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 35727136 DOI: 10.1002/dvdy.512  0.221
2020 Pak JS, DeLoughery ZJ, Wang J, Acharya N, Park Y, Jaworski A, Özkan E. NELL2-Robo3 complex structure reveals mechanisms of receptor activation for axon guidance. Nature Communications. 11: 1489. PMID 32198364 DOI: 10.1038/S41467-020-15211-1  0.206
2007 Araç D, Boucard AA, Ozkan E, Strop P, Newell E, Südhof TC, Brunger AT. Structures of neuroligin-1 and the neuroligin-1/neurexin-1 beta complex reveal specific protein-protein and protein-Ca2+ interactions. Neuron. 56: 992-1003. PMID 18093522 DOI: 10.1016/j.neuron.2007.12.002  0.202
2016 Dong X, Chiu H, Park YJ, Zou W, Zou Y, Özkan E, Chang C, Shen K. Precise regulation of the guidance receptor DMA-1 by KPC-1/Furin instructs dendritic branching decisions. Elife. 5. PMID 26974341 DOI: 10.7554/Elife.11008  0.191
2015 Maro GS, Gao S, Olechwier AM, Hung WL, Liu M, Özkan E, Zhen M, Shen K. MADD-4/Punctin and Neurexin Organize C. elegans GABAergic Postsynapses through Neuroligin. Neuron. 86: 1420-32. PMID 26028574 DOI: 10.1016/J.Neuron.2015.05.015  0.184
2018 Cheng S, Ashley J, Kurleto JD, Lobb-Rabe M, Park YJ, Carrillo RA, Özkan E. Author response: Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila Elife. DOI: 10.7554/Elife.41028.040  0.178
2021 Wang J, Vaddadi N, Pak JS, Park Y, Quilez S, Roman CA, Dumontier E, Thornton JW, Cloutier JF, Özkan E. Molecular and structural basis of olfactory sensory neuron axon coalescence by Kirrel receptors. Cell Reports. 37: 109940. PMID 34731636 DOI: 10.1016/j.celrep.2021.109940  0.173
2019 Stedden CG, Menegas W, Zajac AL, Williams AM, Cheng S, Özkan E, Horne-Badovinac S. Planar-Polarized Semaphorin-5c and Plexin A Promote the Collective Migration of Epithelial Cells in Drosophila. Current Biology : Cb. PMID 30827914 DOI: 10.1016/J.Cub.2019.01.049  0.157
2022 Eichel K, Uenaka T, Belapurkar V, Lu R, Cheng S, Pak JS, Taylor CA, Südhof TC, Malenka R, Wernig M, Özkan E, Perrais D, Shen K. Endocytosis in the axon initial segment maintains neuronal polarity. Nature. PMID 35978188 DOI: 10.1038/s41586-022-05074-5  0.152
2019 Ranaivoson FM, Turk LS, Ozkan E, Montelione GT, Comoletti D. Structure of a heterodimer of neuronal cell surface proteins Structure. DOI: 10.2210/Pdb6Dld/Pdb  0.151
2015 Hara M, Özkan E, Sun H, Yu H, Luo X. Structure of an intermediate conformer of the spindle checkpoint protein Mad2. Proceedings of the National Academy of Sciences of the United States of America. PMID 26305957 DOI: 10.1073/pnas.1512197112  0.147
2023 Nickerson KR, Tom I, Cortés E, Abolafia JR, Özkan E, Gonzalez LC, Jaworski A. WFIKKN2 is a bifunctional axon guidance cue that signals through divergent DCC family receptors. Biorxiv : the Preprint Server For Biology. PMID 37398498 DOI: 10.1101/2023.06.15.544950  0.142
2020 Cheng S, Özkan E. Finally on Track: Interactions of Off-Track with Plex-Sema Pathway and Glycosaminoglycans. Structure (London, England : 1993). 28: 492-494. PMID 32375057 DOI: 10.1016/J.Str.2020.04.014  0.126
2016 Dong X, Chiu H, Park YJ, Zou W, Zou Y, Özkan E, Chang C, Shen K. Author response: Precise regulation of the guidance receptor DMA-1 by KPC-1/Furin instructs dendritic branching decisions Elife. DOI: 10.7554/Elife.11008.021  0.119
2023 Wong S, Tan YX, Loh AYT, Tan KY, Lee H, Aziz Z, Nelson SF, Özkan E, Kayserili H, Escande-Beillard N, Reversade B. RAF1 deficiency causes a lethal syndrome that underscores RTK signaling during embryogenesis. Embo Molecular Medicine. e17078. PMID 37066513 DOI: 10.15252/emmm.202217078  0.109
2013 Zhang B, Choi Y, Ng D, Weng Z, Lo C, Ghebremariam Y, Özkan E, Liao C, Inoue S, Hallmayer J, Garcia C, Cooke J, Tang H, Sidow A, Zehnder JL. Identification Of The Disease-Causing Mutation In Autosomal Dominant Familial Immune Thrombocytopenia By Genome-Wide Linkage Analysis and Whole Genome Sequencing Blood. 122: 565-565. DOI: 10.1182/Blood.V122.21.565.565  0.102
2017 Aydoğdu A, Flicker YZ, Özkan E, Öztürk R. Explicit forms of the trace formula for GL(2) Journal D'Analyse MathéMatique. 131: 1-71. DOI: 10.1007/S11854-017-0001-Z  0.035
2014 Özkan E. Truncated Lucas sequence and its period Applied Mathematics and Computation. 232: 285-291. DOI: 10.1016/j.amc.2014.01.014  0.033
2003 Özkan E. 3-Step Fibonacci sequences in nilpotent groups Applied Mathematics and Computation. 144: 517-527. DOI: 10.1016/S0096-3003(02)00427-7  0.031
2003 Özkan E, Aydın H, Dikici R. 3-Step Fibonacci series modulo m Applied Mathematics and Computation. 143: 165-172. DOI: 10.1016/S0096-3003(02)00360-0  0.031
2003 Dikici R, Özkan E. An application of Fibonacci sequences in groups Applied Mathematics and Computation. 136: 323-331. DOI: 10.1016/S0096-3003(02)00044-9  0.031
2003 Özkan E, Aydın H, Dikici R. Applications of Fibonacci sequences in a finite nilpotent group Applied Mathematics and Computation. 141: 565-578. DOI: 10.1016/S0096-3003(02)00276-X  0.029
2020 ÖZKAN E, TAŞTAN M. A NEW FAMILIES OF GAUSS k-JACOBSTHAL NUMBERS AND GAUSS k-JACOBSTHAL-LUCAS NUMBERS AND THEIR POLYNOMIALS Journal of Science and Arts. 20: 893-908. DOI: 10.46939/j.sci.arts-20.4-a10  0.027
2001 Ağargün A, Özkan E. A Historical Survey of the Fundamental Theorem of Arithmetic Historia Mathematica. 28: 207-214. DOI: 10.1006/HMAT.2001.2318  0.012
2019 Özkan E, Taştan M. On Gauss Fibonacci polynomials, on Gauss Lucas polynomials and their applications Communications in Algebra. 48: 952-960. DOI: 10.1080/00927872.2019.1670193  0.011
2019 Özkan E, Altun İ. Generalized Lucas polynomials and relationships between the Fibonacci polynomials and Lucas polynomials Communications in Algebra. 47: 4020-4030. DOI: 10.1080/00927872.2019.1576186  0.01
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