Daniel A. Wagenaar - Publications

Affiliations: 
Biology California Institute of Technology, Pasadena, CA 
Area:
Multisensory integration in the medicinal leech
Website:
http://www.danielwagenaar.net

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Kahan A, Greenbaum A, Jang MJ, Robinson JE, Cho JR, Chen X, Kassraian P, Wagenaar DA, Gradinaru V. Light-guided sectioning for precise in situ localization and tissue interface analysis for brain-implanted optical fibers and GRIN lenses. Cell Reports. 36: 109744. PMID 34592157 DOI: 10.1016/j.celrep.2021.109744  0.738
2021 Ashaber M, Tomina Y, Kassraian P, Bushong EA, Kristan WB, Ellisman MH, Wagenaar DA. Anatomy and activity patterns in a multifunctional motor neuron and its surrounding circuits. Elife. 10. PMID 33587033 DOI: 10.7554/eLife.61881  0.711
2020 Kennedy A, Kunwar PS, Li LY, Stagkourakis S, Wagenaar DA, Anderson DJ. Stimulus-specific hypothalamic encoding of a persistent defensive state. Nature. PMID 32939094 DOI: 10.1038/S41586-020-2728-4  0.384
2018 Tomina Y, Wagenaar DA. Dual-sided Voltage-sensitive Dye Imaging of Leech Ganglia. Bio-Protocol. 8. PMID 29594188 DOI: 10.21769/BioProtoc.2751  0.761
2018 TOMINA Y, WAGENAAR DA. Comprehensive voltage sensitive dye imaging in the leech nervous system using double-sided microscopy Hikaku Seiri Seikagaku(Comparative Physiology and Biochemistry). 35: 168-177. DOI: 10.3330/Hikakuseiriseika.35.168  0.759
2017 Tomina Y, Wagenaar DA. A double-sided microscope to realize whole-ganglion imaging of membrane potential in the medicinal leech. Elife. 6. PMID 28944754 DOI: 10.7554/Elife.29839  0.759
2017 Tomina Y, Wagenaar DA. Author response: A double-sided microscope to realize whole-ganglion imaging of membrane potential in the medicinal leech Elife. DOI: 10.7554/Elife.29839.022  0.759
2015 Nagarah JM, Stowasser A, Parker RL, Asari H, Wagenaar DA. Optically transparent multi-suction electrode arrays. Frontiers in Neuroscience. 9: 384. PMID 26539078 DOI: 10.3389/Fnins.2015.00384  0.788
2015 Baljon PL, Wagenaar DA. Responses to conflicting stimuli in a simple stimulus-response pathway. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 2398-406. PMID 25673834 DOI: 10.1523/JNEUROSCI.3823-14.2015  0.751
2014 Romanenko S, Siegel PH, Wagenaar DA, Pikov V. Effects of millimeter wave irradiation and equivalent thermal heating on the activity of individual neurons in the leech ganglion. Journal of Neurophysiology. 112: 2423-31. PMID 25122711 DOI: 10.1152/Jn.00357.2014  0.309
2014 Harley CM, Wagenaar DA. Scanning behavior in the medicinal leech Hirudo verbana. Plos One. 9: e86120. PMID 24465907 DOI: 10.1371/journal.pone.0086120  0.576
2014 Nagarah JM, Wagenaar DA. Transparent Multi-Suction Electrode Arrays for in vitro Neural Network Investigations Biophysical Journal. 106: 417a. DOI: 10.1016/J.Bpj.2013.11.2346  0.761
2013 Harley CM, Rossi M, Cienfuegos J, Wagenaar D. Discontinuous locomotion and prey sensing in the leech. The Journal of Experimental Biology. 216: 1890-7. PMID 23785108 DOI: 10.1242/Jeb.075911  0.675
2013 Romanenko S, Siegel PH, Wagenaar DA, Pikov V. Comparison of the effects of millimeter wave irradiation, general bath heating, and localized heating on neuronal activity in the leech ganglion Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8585. DOI: 10.1117/12.2006504  0.366
2012 Nagarah JM, Wagenaar DA. Ultradeep fused silica glass etching with an HF-resistant photosensitive resist for optical imaging applications Journal of Micromechanics and Microengineering. 22. DOI: 10.1088/0960-1317/22/3/035011  0.761
2011 Harley CM, Cienfuegos J, Wagenaar DA. Developmentally regulated multisensory integration for prey localization in the medicinal leech. The Journal of Experimental Biology. 214: 3801-7. PMID 22031745 DOI: 10.1242/Jeb.059618  0.655
2011 Nagarah JM, Baljon PL, Wagenaar DA. Multisuction Electrode Arrays to Investigate Multi-Sensory Integration in Neural Tissue Biophysical Journal. 100: 620a. DOI: 10.1016/J.Bpj.2010.12.3570  0.734
2010 Wagenaar DA, Gonzalez R, Ries DC, Kristan WB, French KA. Alpha-conotoxin ImI disrupts central control of swimming in the medicinal leech. Neuroscience Letters. 485: 151-6. PMID 20833225 DOI: 10.1016/j.neulet.2010.08.078  0.563
2010 Wagenaar DA, Hamilton MS, Huang T, Kristan WB, French KA. A hormone-activated central pattern generator for courtship. Current Biology : Cb. 20: 487-95. PMID 20226670 DOI: 10.1016/j.cub.2010.02.027  0.581
2010 Wagenaar DA, Kristan WB. Automated video analysis of animal movements using Gabor orientation filters. Neuroinformatics. 8: 33-42. PMID 20127206 DOI: 10.1007/s12021-010-9062-1  0.55
2010 Nagarah JM, Wagenaar DA, Heath JR. Planar Patch-Clamp Electrodes for Single Cell and Neural Network Studies Biophysical Journal. 98: 603a. DOI: 10.1016/J.Bpj.2009.12.3287  0.795
2008 Fortin DL, Banghart MR, Dunn TW, Borges K, Wagenaar DA, Gaudry Q, Karakossian MH, Otis TS, Kristan WB, Trauner D, Kramer RH. Photochemical control of endogenous ion channels and cellular excitability. Nature Methods. 5: 331-8. PMID 18311146 DOI: 10.1038/Nmeth.1187  0.754
2008 Baca SM, Marin-Burgin A, Wagenaar DA, Kristan WB. Widespread inhibition proportional to excitation controls the gain of a leech behavioral circuit. Neuron. 57: 276-89. PMID 18215624 DOI: 10.1016/J.Neuron.2007.11.028  0.763
2007 Rolston JD, Wagenaar DA, Potter SM. Precisely timed spatiotemporal patterns of neural activity in dissociated cortical cultures. Neuroscience. 148: 294-303. PMID 17614210 DOI: 10.1016/j.neuroscience.2007.05.025  0.79
2007 Wagenaar DA, Pine J, Potter SM. Erratum to: searching for plasticity in dissociated cortical cultures on multi-electrode arrays Journal of Negative Results in Biomedicine. 6. DOI: 10.1186/1477-5751-6-3  0.753
2006 Madhavan R, Chao ZC, Wagenaar DA, Bakkum DJ, Potter SM. Multi-site stimulation quiets network-wide spontaneous bursts and enhances functional plasticity in cultured cortical networks. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 1593-6. PMID 17946052 DOI: 10.1109/IEMBS.2006.260571  0.711
2006 Wagenaar DA, Pine J, Potter SM. Searching for plasticity in dissociated cortical cultures on multi-electrode arrays. Journal of Negative Results in Biomedicine. 5: 16. PMID 17067395 DOI: 10.1186/1477-5751-5-16  0.789
2006 Wagenaar DA, Nadasdy Z, Potter SM. Persistent dynamic attractors in activity patterns of cultured neuronal networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 051907. PMID 16802967 DOI: 10.1103/Physreve.73.051907  0.796
2006 Wagenaar DA, Pine J, Potter SM. An extremely rich repertoire of bursting patterns during the development of cortical cultures. Bmc Neuroscience. 7: 11. PMID 16464257 DOI: 10.1186/1471-2202-7-11  0.794
2006 Potter SM, Wagenaar DA, Demarse TB. Closing the loop: Stimulation feedback systems for embodied MEA cultures Advances in Network Electrophysiology: Using Multi-Electrode Arrays. 215-242. DOI: 10.1007/0-387-25858-2_9  0.765
2005 Fonck C, Cohen BN, Nashmi R, Whiteaker P, Wagenaar DA, Rodrigues-Pinguet N, Deshpande P, McKinney S, Kwoh S, Munoz J, Labarca C, Collins AC, Marks MJ, Lester HA. Novel seizure phenotype and sleep disruptions in knock-in mice with hypersensitive alpha 4* nicotinic receptors. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 11396-411. PMID 16339034 DOI: 10.1523/Jneurosci.3597-05.2005  0.448
2005 Chao ZC, Bakkum DJ, Wagenaar DA, Potter SM. Effects of random external background stimulation on network synaptic stability after tetanization: a modeling study. Neuroinformatics. 3: 263-80. PMID 16077162 DOI: 10.1385/NI:3:3:263  0.706
2005 Wagenaar DA, Madhavan R, Pine J, Potter SM. Controlling bursting in cortical cultures with closed-loop multi-electrode stimulation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 680-8. PMID 15659605 DOI: 10.1523/JNEUROSCI.4209-04.2005  0.808
2005 Wagenaar D, Demarse TB, Potter SM. MeaBench: A toolset for multi-electrode data acquisition and on-line analysis 2nd International Ieee Embs Conference On Neural Engineering. 2005: 518-521. DOI: 10.1109/CNE.2005.1419673  0.759
2004 Wagenaar DA, Potter SM. A versatile all-channel stimulator for electrode arrays, with real-time control. Journal of Neural Engineering. 1: 39-45. PMID 15876621 DOI: 10.1088/1741-2560/1/1/006  0.709
2004 Wagenaar DA, Pine J, Potter SM. Effective parameters for stimulation of dissociated cultures using multi-electrode arrays. Journal of Neuroscience Methods. 138: 27-37. PMID 15325108 DOI: 10.1016/j.jneumeth.2004.03.005  0.783
2003 Potter SM, DeMarse TB, Blau AW, Wagenaar DA. Multi-photon time-lapse microscopy and optical recording to study neural processing and plasticity Microscopy and Microanalysis. 9: 184-185. DOI: 10.1017/S1431927603440907  0.788
2003 Potter SM, Wagenaar DA, Madhavan R, DeMarse TB. Long-Term Bidirectional Neuron Interfaces for Robotic Control, and In Vitro Learning Studies Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 4: 3690-3693.  0.766
2002 Wagenaar DA, Potter SM. Real-time multi-channel stimulus artifact suppression by local curve fitting. Journal of Neuroscience Methods. 120: 113-20. PMID 12385761 DOI: 10.1016/S0165-0270(02)00149-8  0.718
2001 Demarse TB, Wagenaar DA, Blau AW, Potter SM. The Neurally Controlled Animat: Biological Brains Acting with Simulated Bodies. Autonomous Robots. 11: 305-310. PMID 18584059 DOI: 10.1023/A:1012407611130  0.793
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