Genevieve Konopka - Publications

Affiliations: 
University of California, Los Angeles, Los Angeles, CA 
Area:
language, evolution, autism

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Xu P, Berto S, Kulkarni A, Jeong B, Joseph C, Cox KH, Greenberg ME, Kim TK, Konopka G, Takahashi JS. NPAS4 regulates the transcriptional response of the suprachiasmatic nucleus to light and circadian behavior. Neuron. PMID 34416169 DOI: 10.1016/j.neuron.2021.07.026  0.433
2021 Ayhan F, Kulkarni A, Berto S, Sivaprakasam K, Douglas C, Lega BC, Konopka G. Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans. Neuron. PMID 34051145 DOI: 10.1016/j.neuron.2021.05.003  0.341
2021 Xiao L, Merullo DP, Koch TMI, Cao M, Co M, Kulkarni A, Konopka G, Roberts TF. Expression of FoxP2 in the basal ganglia regulates vocal motor sequences in the adult songbird. Nature Communications. 12: 2617. PMID 33976169 DOI: 10.1038/s41467-021-22918-2  0.767
2021 Usui N, Berto S, Konishi A, Kondo M, Konopka G, Matsuzaki H, Shimada S. Zbtb16 regulates social cognitive behaviors and neocortical development. Translational Psychiatry. 11: 242. PMID 33895774 DOI: 10.1038/s41398-021-01358-y  0.303
2021 Jeong H, Mendizabal I, Berto S, Chatterjee P, Layman T, Usui N, Toriumi K, Douglas C, Singh D, Huh I, Preuss TM, Konopka G, Yi SV. Evolution of DNA methylation in the human brain. Nature Communications. 12: 2021. PMID 33795684 DOI: 10.1038/s41467-021-21917-7  0.643
2021 Berto S, Fontenot MR, Seger S, Ayhan F, Caglayan E, Kulkarni A, Douglas C, Tamminga CA, Lega BC, Konopka G. Gene-expression correlates of the oscillatory signatures supporting human episodic memory encoding. Nature Neuroscience. PMID 33686299 DOI: 10.1038/s41593-021-00803-x  0.306
2020 Liu Y, Konopka G. An integrative understanding of comparative cognition: lessons from human brain evolution. Integrative and Comparative Biology. PMID 32681799 DOI: 10.1093/icb/icaa109  0.457
2020 Berto S, Liu Y, Konopka G. Genomics at cellular resolution: insights into cognitive disorders and their evolution. Human Molecular Genetics. PMID 32566943 DOI: 10.1093/hmg/ddaa117  0.455
2020 Li Y, Shan Y, Kilaru GK, Berto S, Wang GZ, Cox KH, Yoo SH, Yang S, Konopka G, Takahashi JS. Epigenetic inheritance of circadian period in clonal cells. Elife. 9. PMID 32459177 DOI: 10.7554/Elife.54186  0.43
2020 Harrington AJ, Bridges CM, Berto S, Blankenship K, Cho JY, Assali A, Siemsen BM, Moore HW, Tsvetkov E, Thielking A, Konopka G, Everman DB, Scofield MD, Skinner SA, Cowan CW. MEF2C Hypofunction in Neuronal and Neuroimmune Populations Produces MEF2C Haploinsufficiency Syndrome-like Behaviors in Mice. Biological Psychiatry. PMID 32418612 DOI: 10.1016/J.Biopsych.2020.03.011  0.33
2020 Perez JM, Berto S, Gleason K, Ghose S, Tan C, Kim TK, Konopka G, Tamminga CA. Hippocampal subfield transcriptome analysis in schizophrenia psychosis. Molecular Psychiatry. PMID 32152472 DOI: 10.1038/S41380-020-0696-6  0.3
2020 Anderson AG, Kulkarni A, Harper M, Konopka G. Single-Cell Analysis of Foxp1-Driven Mechanisms Essential for Striatal Development. Cell Reports. 30: 3051-3066.e7. PMID 32130906 DOI: 10.1016/j.celrep.2020.02.030  0.429
2020 Co M, Anderson AG, Konopka G. FOXP transcription factors in vertebrate brain development, function, and disorders. Wiley Interdisciplinary Reviews. Developmental Biology. e375. PMID 31999079 DOI: 10.1002/Wdev.375  0.82
2020 Mendizabal I, Berto S, Usui N, Toriumi K, Chatterjee P, Douglas C, Huh I, Jeong H, Layman T, Tamminga C, Preuss T, Konopka G, Yi S. Cell-Type Specific Epigenetic Links to Schizophrenia Risk in Control and Patients Biological Psychiatry. 87. DOI: 10.1016/J.Biopsych.2020.02.176  0.566
2019 Berto S, Mendizabal I, Usui N, Toriumi K, Chatterjee P, Douglas C, Tamminga CA, Preuss TM, Yi SV, Konopka G. Accelerated evolution of oligodendrocytes in the human brain. Proceedings of the National Academy of Sciences of the United States of America. PMID 31712436 DOI: 10.1073/Pnas.1907982116  0.721
2019 Co M, Hickey SL, Kulkarni A, Harper M, Konopka G. Cortical Foxp2 Supports Behavioral Flexibility and Developmental Dopamine D1 Receptor Expression. Cerebral Cortex (New York, N.Y. : 1991). PMID 31711176 DOI: 10.1093/Cercor/Bhz209  0.779
2019 Onder Y, Laothamatas I, Berto S, Sewart K, Kilaru G, Bordieanu B, Stubblefield JJ, Konopka G, Mishra P, Green CB. The Circadian Protein Nocturnin Regulates Metabolic Adaptation in Brown Adipose Tissue. Iscience. 19: 83-92. PMID 31357170 DOI: 10.1016/J.Isci.2019.07.016  0.312
2019 Mendizabal I, Berto S, Usui N, Toriumi K, Chatterjee P, Douglas C, Huh I, Jeong H, Layman T, Tamminga CA, Preuss TM, Konopka G, Yi SV. Cell type-specific epigenetic links to schizophrenia risk in the brain. Genome Biology. 20: 135. PMID 31288836 DOI: 10.1186/S13059-019-1747-7  0.646
2019 Kulkarni A, Anderson AG, Merullo DP, Konopka G. Beyond bulk: a review of single cell transcriptomics methodologies and applications. Current Opinion in Biotechnology. 58: 129-136. PMID 30978643 DOI: 10.1016/j.copbio.2019.03.001  0.381
2019 Shimada IS, Somatilaka BN, Hwang SH, Anderson AG, Shelton JM, Rajaram V, Konopka G, Mukhopadhyay S. Derepression of sonic hedgehog signaling upon Gpr161 deletion unravels forebrain and ventricular abnormalities. Developmental Biology. PMID 30914320 DOI: 10.1016/J.Ydbio.2019.03.011  0.388
2017 Fontenot MR, Berto S, Liu Y, Werthmann G, Douglas C, Usui N, Gleason K, Tamminga CA, Takahashi JS, Konopka G. Novel transcriptional networks regulated by CLOCK in human neurons. Genes & Development. 31: 2121-2135. PMID 29196536 DOI: 10.1101/Gad.305813.117  0.544
2017 Usui N, Araujo DJ, Kulkarni A, Co M, Ellegood J, Harper M, Toriumi K, Lerch JP, Konopka G. Foxp1 regulation of neonatal vocalizations via cortical development. Genes & Development. PMID 29138280 DOI: 10.1101/Gad.305037.117  0.804
2017 Escamilla CO, Filonova I, Walker AK, Xuan ZX, Holehonnur R, Espinosa F, Liu S, Thyme SB, López-García IA, Mendoza DB, Usui N, Ellegood J, Eisch AJ, Konopka G, Lerch JP, et al. Kctd13 deletion reduces synaptic transmission via increased RhoA. Nature. PMID 29088697 DOI: 10.1038/Nature24470  0.433
2017 Araujo DJ, Toriumi K, Escamilla CO, Kulkarni A, Anderson AG, Harper M, Usui N, Ellegood J, Lerch JP, Birnbaum SG, Tucker HO, Powell CM, Konopka G. Foxp1 in forebrain pyramidal neurons controls gene expression required for spatial learning and synaptic plasticity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 28978667 DOI: 10.1523/JNEUROSCI.1005-17.2017  0.449
2017 Berto S, Wang GZ, Germi J, Lega BC, Konopka G. Human Genomic Signatures of Brain Oscillations During Memory Encoding. Cerebral Cortex (New York, N.Y. : 1991). 1-16. PMID 28383644 DOI: 10.1093/cercor/bhx083  0.429
2016 Harrington AJ, Raissi A, Rajkovich K, Berto S, Kumar J, Molinaro G, Raduazzo J, Guo Y, Loerwald K, Konopka G, Huber KM, Cowan CW. MEF2C regulates cortical inhibitory and excitatory synapses and behaviors relevant to neurodevelopmental disorders. Elife. 5. PMID 27779093 DOI: 10.7554/Elife.20059  0.413
2016 Mendizabal I, Shi L, Keller TE, Konopka G, Preuss TM, Hsieh TF, Hu E, Zhang Z, Su B, Yi SV. Comparative Methylome Analyses Identify Epigenetic Regulatory Loci of Human Brain Evolution. Molecular Biology and Evolution. PMID 27563052 DOI: 10.1093/Molbev/Msw176  0.685
2016 Hanners NW, Eitson JL, Usui N, Richardson RB, Wexler EM, Konopka G, Schoggins JW. Western Zika Virus in Human Fetal Neural Progenitors Persists Long Term with Partial Cytopathic and Limited Immunogenic Effects. Cell Reports. PMID 27268504 DOI: 10.1016/J.Celrep.2016.05.075  0.669
2016 Berto S, Usui N, Konopka G, Fogel BL. ELAVL2-regulated transcriptional and splicing networks in human neurons link neurodevelopment and autism. Human Molecular Genetics. PMID 27260404 DOI: 10.1093/Hmg/Ddw110  0.528
2016 Usui N, Co M, Harper M, Rieger MA, Dougherty JD, Konopka G. Sumoylation of FOXP2 Regulates Motor Function and Vocal Communication Through Purkinje Cell Development. Biological Psychiatry. PMID 27009683 DOI: 10.1016/J.Biopsych.2016.02.008  0.795
2016 Konopka G, Roberts TF. Insights into the Neural and Genetic Basis of Vocal Communication. Cell. 164: 1269-76. PMID 26967292 DOI: 10.1016/j.cell.2016.02.039  0.338
2015 Wang GZ, Hickey SL, Shi L, Huang HC, Nakashe P, Koike N, Tu BP, Takahashi JS, Konopka G. Cycling Transcriptional Networks Optimize Energy Utilization on a Genome Scale. Cell Reports. 13: 1868-1880. PMID 26655902 DOI: 10.1016/J.Celrep.2015.10.043  0.418
2015 Wang GZ, Belgard TG, Mao D, Chen L, Berto S, Preuss TM, Lu H, Geschwind DH, Konopka G. Correspondence between Resting-State Activity and Brain Gene Expression. Neuron. 88: 659-666. PMID 26590343 DOI: 10.1016/J.Neuron.2015.10.022  0.784
2015 Araujo DJ, Anderson AG, Berto S, Runnels W, Harper M, Ammanuel S, Rieger MA, Huang HC, Rajkovich K, Loerwald KW, Dekker JD, Tucker HO, Dougherty JD, Gibson JR, Konopka G. FoxP1 orchestration of ASD-relevant signaling pathways in the striatum. Genes & Development. 29: 2081-96. PMID 26494785 DOI: 10.1101/Gad.267989.115  0.712
2015 Konopka G, Roberts TF. Animal Models of Speech and Vocal Communication Deficits Associated with Psychiatric Disorders. Biological Psychiatry. PMID 26232298 DOI: 10.1016/j.biopsych.2015.07.001  0.387
2014 Frank E, Benabou M, Bentzley B, Bianchi M, Goldstein T, Konopka G, Maywood E, Pritchett D, Sheaves B, Thomas J. Influencing circadian and sleep-wake regulation for prevention and intervention in mood and anxiety disorders: what makes a good homeostat? Annals of the New York Academy of Sciences. 1334: 1-25. PMID 25532787 DOI: 10.1111/Nyas.12600  0.343
2014 Usui N, Co M, Konopka G. Decoding the molecular evolution of human cognition using comparative genomics. Brain, Behavior and Evolution. 84: 103-16. PMID 25247723 DOI: 10.1159/000365182  0.792
2014 Fogel BL, Cho E, Wahnich A, Gao F, Becherel OJ, Wang X, Fike F, Chen L, Criscuolo C, De Michele G, Filla A, Collins A, Hahn AF, Gatti RA, Konopka G, et al. Mutation of senataxin alters disease-specific transcriptional networks in patients with ataxia with oculomotor apraxia type 2. Human Molecular Genetics. 23: 4758-69. PMID 24760770 DOI: 10.1093/Hmg/Ddu190  0.607
2013 Lepp S, Anderson A, Konopka G. Connecting signaling pathways underlying communication to ASD vulnerability. International Review of Neurobiology. 113: 97-133. PMID 24290384 DOI: 10.1016/B978-0-12-418700-9.00004-6  0.471
2012 Bowers JM, Konopka G. ASD-relevant Animal Models of the Foxp Family of Transcription Factors. Autism-Open Access. PMID 24358452 DOI: 10.4172/2165-7890.S1-010  0.405
2012 Bowers JM, Konopka G. The role of the FOXP family of transcription factors in ASD. Disease Markers. 33: 251-60. PMID 22960337 DOI: 10.3233/DMA-2012-0919  0.481
2012 Zeng J, Konopka G, Hunt BG, Preuss TM, Geschwind D, Yi SV. Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution. American Journal of Human Genetics. 91: 455-65. PMID 22922032 DOI: 10.1016/J.Ajhg.2012.07.024  0.718
2012 Konopka G, Friedrich T, Davis-Turak J, Winden K, Oldham MC, Gao F, Chen L, Wang GZ, Luo R, Preuss TM, Geschwind DH. Human-specific transcriptional networks in the brain. Neuron. 75: 601-17. PMID 22920253 DOI: 10.1016/J.Neuron.2012.05.034  0.82
2012 Fogel BL, Wexler E, Wahnich A, Friedrich T, Vijayendran C, Gao F, Parikshak N, Konopka G, Geschwind DH. RBFOX1 regulates both splicing and transcriptional networks in human neuronal development. Human Molecular Genetics. 21: 4171-86. PMID 22730494 DOI: 10.1093/Hmg/Dds240  0.806
2012 Geschwind DH, Konopka G. Neuroscience: Genes and human brain evolution. Nature. 486: 481-2. PMID 22722844 DOI: 10.1038/nature11380  0.608
2012 Puram SV, Yeung CM, Jahani-Asl A, Lin C, de la Iglesia N, Konopka G, Jackson-Grusby L, Bonni A. STAT3-iNOS Signaling Mediates EGFRvIII-Induced Glial Proliferation and Transformation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 7806-18. PMID 22674257 DOI: 10.1523/Jneurosci.3243-11.2012  0.752
2012 Konopka G, Wexler E, Rosen E, Mukamel Z, Osborn GE, Chen L, Lu D, Gao F, Gao K, Lowe JK, Geschwind DH. Modeling the functional genomics of autism using human neurons. Molecular Psychiatry. 17: 202-14. PMID 21647150 DOI: 10.1038/mp.2011.60  0.806
2011 DeLaForest A, Nagaoka M, Si-Tayeb K, Noto FK, Konopka G, Battle MA, Duncan SA. HNF4A is essential for specification of hepatic progenitors from human pluripotent stem cells. Development (Cambridge, England). 138: 4143-53. PMID 21852396 DOI: 10.1242/Jcs.099614  0.37
2011 Mukamel Z, Konopka G, Wexler E, Osborn GE, Dong H, Bergman MY, Levitt P, Geschwind DH. Regulation of MET by FOXP2, genes implicated in higher cognitive dysfunction and autism risk. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 11437-42. PMID 21832174 DOI: 10.1523/JNEUROSCI.0181-11.2011  0.781
2010 Konopka G, Geschwind DH. Human brain evolution: harnessing the genomics (r)evolution to link genes, cognition, and behavior. Neuron. 68: 231-44. PMID 20955931 DOI: 10.1016/j.neuron.2010.10.012  0.591
2009 Konopka G, Bomar JM, Winden K, Coppola G, Jonsson ZO, Gao F, Peng S, Preuss TM, Wohlschlegel JA, Geschwind DH. Human-specific transcriptional regulation of CNS development genes by FOXP2. Nature. 462: 213-7. PMID 19907493 DOI: 10.1038/Nature08549  0.804
2009 Geschwind DH, Konopka G. Neuroscience in the era of functional genomics and systems biology. Nature. 461: 908-15. PMID 19829370 DOI: 10.1038/nature08537  0.493
2009 Coppola G, Winden K, Konopka G, Gao F, Geschwind D. Expression and network analysis of Illumina microarray data Nature Protocols. DOI: 10.1038/Nprot.2009.215  0.754
2008 Oldham MC, Konopka G, Iwamoto K, Langfelder P, Kato T, Horvath S, Geschwind DH. Functional organization of the transcriptome in human brain. Nature Neuroscience. 11: 1271-82. PMID 18849986 DOI: 10.1038/nn.2207  0.641
2008 de la Iglesia N, Konopka G, Lim KL, Nutt CL, Bromberg JF, Frank DA, Mischel PS, Louis DN, Bonni A. Deregulation of a STAT3-interleukin 8 signaling pathway promotes human glioblastoma cell proliferation and invasiveness. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 5870-8. PMID 18524891 DOI: 10.1523/Jneurosci.5385-07.2008  0.727
2008 de la Iglesia N, Konopka G, Puram SV, Chan JA, Bachoo RM, You MJ, Levy DE, Depinho RA, Bonni A. Identification of a PTEN-regulated STAT3 brain tumor suppressor pathway. Genes & Development. 22: 449-62. PMID 18258752 DOI: 10.1101/Gad.1606508  0.72
2007 Spiteri E, Konopka G, Coppola G, Bomar J, Oldham M, Ou J, Vernes SC, Fisher SE, Ren B, Geschwind DH. Identification of the transcriptional targets of FOXP2, a gene linked to speech and language, in developing human brain. American Journal of Human Genetics. 81: 1144-57. PMID 17999357 DOI: 10.1086/522237  0.643
2006 Battle MA, Konopka G, Parviz F, Gaggl AL, Yang C, Sladek FM, Duncan SA. Hepatocyte nuclear factor 4alpha orchestrates expression of cell adhesion proteins during the epithelial transformation of the developing liver. Proceedings of the National Academy of Sciences of the United States of America. 103: 8419-24. PMID 16714383 DOI: 10.1073/Pnas.0600246103  0.341
2004 Chylack LT, Fu L, Mancini R, Martin-Rehrmann MD, Saunders AJ, Konopka G, Tian D, Hedley-Whyte ET, Folkerth RD, Goldstein LE. Lens epithelium-derived growth factor (LEDGF/p75) expression in fetal and adult human brain. Experimental Eye Research. 79: 941-8. PMID 15642333 DOI: 10.1016/J.Exer.2004.08.022  0.443
2003 Konopka G, Bonni A. Signaling pathways regulating gliomagenesis. Current Molecular Medicine. 3: 73-84. PMID 12558076 DOI: 10.2174/1566524033361609  0.635
2000 Simbulan-Rosenthal CM, Ly DH, Rosenthal DS, Konopka G, Luo R, Wang ZQ, Schultz PG, Smulson ME. Misregulation of gene expression in primary fibroblasts lacking poly(ADP-ribose) polymerase. Proceedings of the National Academy of Sciences of the United States of America. 97: 11274-9. PMID 11016956 DOI: 10.1073/Pnas.200285797  0.417
Show low-probability matches.