| Year |
Citation |
Score |
| 2023 |
Shanmugasundram A, Starns D, Böhme U, Amos B, Wilkinson PA, Harb OS, Warrenfeltz S, Kissinger JC, McDowell MA, Roos DS, Crouch K, Jones AR. TriTrypDB: An integrated functional genomics resource for kinetoplastida. Plos Neglected Tropical Diseases. 17: e0011058. PMID 36656904 DOI: 10.1371/journal.pntd.0011058 |
0.751 |
|
| 2022 |
Nevers Y, Jones TEM, Jyothi D, Yates B, Ferret M, Portell-Silva L, Codo L, Cosentino S, Marcet-Houben M, Vlasova A, Poidevin L, Kress A, Hickman M, Persson E, Piližota I, ... ... Roos DS, et al. The Quest for Orthologs orthology benchmark service in 2022. Nucleic Acids Research. PMID 35552456 DOI: 10.1093/nar/gkac330 |
0.393 |
|
| 2021 |
Giraldo-Calderón GI, Harb OS, Kelly SA, Rund SS, Roos DS, McDowell MA. VectorBase.org updates: bioinformatic resources for invertebrate vectors of human pathogens and related organisms. Current Opinion in Insect Science. 50: 100860. PMID 34864248 DOI: 10.1016/j.cois.2021.11.008 |
0.567 |
|
| 2021 |
Amos B, Aurrecoechea C, Barba M, Barreto A, Basenko EY, Bażant W, Belnap R, Blevins AS, Böhme U, Brestelli J, Brunk BP, Caddick M, Callan D, Campbell L, Christensen MB, ... ... Roos DS, et al. VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Research. PMID 34718728 DOI: 10.1093/nar/gkab929 |
0.657 |
|
| 2019 |
Ruhamyankaka E, Brunk BP, Dorsey G, Harb OS, Helb DA, Judkins J, Kissinger JC, Lindsay B, Roos DS, San EJ, Stoeckert CJ, Zheng J, Tomko SS. ClinEpiDB: an open-access clinical epidemiology database resource encouraging online exploration of complex studies. Gates Open Research. 3: 1661. PMID 32047873 DOI: 10.12688/gatesopenres.13087.1 |
0.65 |
|
| 2018 |
Basenko EY, Pulman JA, Shanmugasundram A, Harb OS, Crouch K, Starns D, Warrenfeltz S, Aurrecoechea C, Stoeckert CJ, Kissinger JC, Roos DS, Hertz-Fowler C. FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes. Journal of Fungi (Basel, Switzerland). 4. PMID 30152809 DOI: 10.3390/Jof4010039 |
0.762 |
|
| 2018 |
Warrenfeltz S, Basenko EY, Crouch K, Harb OS, Kissinger JC, Roos DS, Shanmugasundram A, Silva-Franco F. EuPathDB: The Eukaryotic Pathogen Genomics Database Resource. Methods in Molecular Biology (Clifton, N.J.). 1757: 69-113. PMID 29761457 DOI: 10.1007/978-1-4939-7737-6_5 |
0.715 |
|
| 2017 |
Oliveira FS, Brestelli J, Cade S, Zheng J, Iodice J, Fischer S, Aurrecoechea C, Kissinger JC, Brunk BP, Stoeckert CJ, Fernandes GR, Roos DS, Beiting DP. MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments. Nucleic Acids Research. PMID 29106667 DOI: 10.1093/Nar/Gkx1027 |
0.61 |
|
| 2016 |
Aurrecoechea C, Barreto A, Basenko EY, Brestelli J, Brunk BP, Cade S, Crouch K, Doherty R, Falke D, Fischer S, Gajria B, Harb OS, Heiges M, Hertz-Fowler C, Hu S, ... ... Roos DS, et al. EuPathDB: the eukaryotic pathogen genomics database resource. Nucleic Acids Research. PMID 27903906 DOI: 10.1093/Nar/Gkw1105 |
0.731 |
|
| 2016 |
Lorenzi H, Khan A, Behnke MS, Namasivayam S, Swapna LS, Hadjithomas M, Karamycheva S, Pinney D, Brunk BP, Ajioka JW, Ajzenberg D, Boothroyd JC, Boyle JP, Dardé ML, Diaz-Miranda MA, ... ... Roos DS, et al. Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes. Nature Communications. 7: 10147. PMID 26738725 DOI: 10.1038/Ncomms10147 |
0.595 |
|
| 2015 |
Carlton JM, Volkman SK, Uplekar S, Hupalo DN, Pereira Alves JM, Cui L, Donnelly M, Roos DS, Harb OS, Acosta M, Read A, Ribolla PE, Singh OP, Valecha N, Wassmer SC, et al. Population Genetics, Evolutionary Genomics, and Genome-Wide Studies of Malaria: A View Across the International Centers of Excellence for Malaria Research. The American Journal of Tropical Medicine and Hygiene. 93: 87-98. PMID 26259940 DOI: 10.4269/Ajtmh.15-0049 |
0.418 |
|
| 2015 |
Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlář J, Flegontov P, ... ... Roos DS, et al. Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites. Elife. 4: e06974. PMID 26175406 DOI: 10.7554/Elife.06974 |
0.471 |
|
| 2015 |
Krishna R, Xia D, Sanderson S, Shanmugasundram A, Vermont S, Bernal A, Daniel-Naguib G, Ghali F, Brunk BP, Roos DS, Wastling JM, Jones AR. A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum. Proteomics. PMID 25867681 DOI: 10.1002/pmic.201400553 |
0.325 |
|
| 2014 |
Dugan VG, Emrich SJ, Giraldo-Calderón GI, Harb OS, Newman RM, Pickett BE, Schriml LM, Stockwell TB, Stoeckert CJ, Sullivan DE, Singh I, Ward DV, Yao A, Zheng J, Barrett T, ... ... Roos DS, et al. Standardized metadata for human pathogen/vector genomic sequences. Plos One. 9: e99979. PMID 24936976 DOI: 10.1371/Journal.Pone.0099979 |
0.699 |
|
| 2013 |
Aurrecoechea C, Barreto A, Brestelli J, Brunk BP, Cade S, Doherty R, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Hu S, Iodice J, ... ... Roos DS, et al. EuPathDB: the eukaryotic pathogen database. Nucleic Acids Research. 41: D684-91. PMID 23175615 DOI: 10.1093/Nar/Gks1113 |
0.707 |
|
| 2013 |
Zerlotini A, Aguiar ER, Yu F, Xu H, Li Y, Young ND, Gasser RB, Protasio AV, Berriman M, Roos DS, Kissinger JC, Oliveira G. SchistoDB: an updated genome resource for the three key schistosomes of humans. Nucleic Acids Research. 41: D728-31. PMID 23161692 DOI: 10.1093/Nar/Gks1087 |
0.752 |
|
| 2012 |
Reid AJ, Vermont SJ, Cotton JA, Harris D, Hill-Cawthorne GA, Könen-Waisman S, Latham SM, Mourier T, Norton R, Quail MA, Sanders M, Shanmugam D, Sohal A, Wasmuth JD, Brunk B, ... ... Roos DS, et al. Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: Coccidia differing in host range and transmission strategy. Plos Pathogens. 8: e1002567. PMID 22457617 DOI: 10.1371/Journal.Ppat.1002567 |
0.363 |
|
| 2012 |
Magariños MP, Carmona SJ, Crowther GJ, Ralph SA, Roos DS, Shanmugam D, Van Voorhis WC, Agüero F. TDR Targets: a chemogenomics resource for neglected diseases. Nucleic Acids Research. 40: D1118-27. PMID 22116064 DOI: 10.1093/Nar/Gkr1053 |
0.477 |
|
| 2012 |
Logan-Klumpler FJ, De Silva N, Boehme U, Rogers MB, Velarde G, McQuillan JA, Carver T, Aslett M, Olsen C, Subramanian S, Phan I, Farris C, Mitra S, Ramasamy G, Wang H, ... ... Roos D, et al. GeneDB--an annotation database for pathogens. Nucleic Acids Research. 40: D98-108. PMID 22116062 DOI: 10.1093/Nar/Gkr1032 |
0.63 |
|
| 2012 |
Stajich JE, Harris T, Brunk BP, Brestelli J, Fischer S, Harb OS, Kissinger JC, Li W, Nayak V, Pinney DF, Stoeckert CJ, Roos DS. FungiDB: an integrated functional genomics database for fungi. Nucleic Acids Research. 40: D675-81. PMID 22064857 DOI: 10.1093/Nar/Gkr918 |
0.745 |
|
| 2011 |
Coyne RS, Hannick L, Shanmugam D, Hostetler JB, Brami D, Joardar VS, Johnson J, Radune D, Singh I, Badger JH, Kumar U, Saier M, Wang Y, Cai H, Gu J, ... ... Roos DS, et al. Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control. Genome Biology. 12: R100. PMID 22004680 DOI: 10.1186/Gb-2011-12-10-R100 |
0.409 |
|
| 2011 |
Fischer S, Brunk BP, Chen F, Gao X, Harb OS, Iodice JB, Shanmugam D, Roos DS, Stoeckert CJ. Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups. Current Protocols in Bioinformatics. Unit 6.12.1-19. PMID 21901743 DOI: 10.1002/0471250953.Bi0612S35 |
0.364 |
|
| 2011 |
Fischer S, Aurrecoechea C, Brunk BP, Gao X, Harb OS, Kraemer ET, Pennington C, Treatman C, Kissinger JC, Roos DS, Stoeckert CJ. The Strategies WDK: a graphical search interface and web development kit for functional genomics databases. Database : the Journal of Biological Databases and Curation. 2011: bar027. PMID 21705364 DOI: 10.1093/Database/Bar027 |
0.663 |
|
| 2011 |
Parsons M, Myler PJ, Berriman M, Roos DS, Stuart KD. Identity crisis? The need for systematic gene IDs. Trends in Parasitology. 27: 183-4. PMID 21474380 DOI: 10.1016/J.Pt.2011.02.007 |
0.493 |
|
| 2011 |
Aurrecoechea C, Barreto A, Brestelli J, Brunk BP, Caler EV, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Iodice J, Kissinger JC, Kraemer ET, ... ... Roos DS, et al. AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. Nucleic Acids Research. 39: D612-9. PMID 20974635 DOI: 10.1093/Nar/Gkq1006 |
0.721 |
|
| 2010 |
Bahl A, Davis PH, Behnke M, Dzierszinski F, Jagalur M, Chen F, Shanmugam D, White MW, Kulp D, Roos DS. A novel multifunctional oligonucleotide microarray for Toxoplasma gondii Bmc Genomics. 11. PMID 20974003 DOI: 10.1186/1471-2164-11-603 |
0.376 |
|
| 2010 |
Crowther GJ, Shanmugam D, Carmona SJ, Doyle MA, Hertz-Fowler C, Berriman M, Nwaka S, Ralph SA, Roos DS, Van Voorhis WC, Agüero F. Identification of attractive drug targets in neglected-disease pathogens using an in silico approach. Plos Neglected Tropical Diseases. 4: e804. PMID 20808766 DOI: 10.1371/Journal.Pntd.0000804 |
0.39 |
|
| 2010 |
Peixoto L, Chen F, Harb OS, Davis PH, Beiting DP, Brownback CS, Ouloguem D, Roos DS. Integrative genomic approaches highlight a family of parasite-specific kinases that regulate host responses. Cell Host & Microbe. 8: 208-18. PMID 20709297 DOI: 10.1016/J.Chom.2010.07.004 |
0.382 |
|
| 2010 |
Aurrecoechea C, Brestelli J, Brunk BP, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Innamorato F, Iodice J, Kissinger JC, Kraemer ET, Li W, ... ... Roos DS, et al. EuPathDB: a portal to eukaryotic pathogen databases. Nucleic Acids Research. 38: D415-9. PMID 19914931 DOI: 10.1093/Nar/Gkp941 |
0.614 |
|
| 2010 |
Aslett M, Aurrecoechea C, Berriman M, Brestelli J, Brunk BP, Carrington M, Depledge DP, Fischer S, Gajria B, Gao X, Gardner MJ, Gingle A, Grant G, Harb OS, Heiges M, ... ... Roos DS, et al. TriTrypDB: a functional genomic resource for the Trypanosomatidae. Nucleic Acids Research. 38: D457-62. PMID 19843604 DOI: 10.1093/Nar/Gkp851 |
0.732 |
|
| 2009 |
Aurrecoechea C, Brestelli J, Brunk BP, Dommer J, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Innamorato F, Iodice J, Kissinger JC, Kraemer E, ... ... Roos DS, et al. PlasmoDB: a functional genomic database for malaria parasites. Nucleic Acids Research. 37: D539-43. PMID 18957442 DOI: 10.1093/Nar/Gkn814 |
0.75 |
|
| 2009 |
Aurrecoechea C, Brestelli J, Brunk BP, Carlton JM, Dommer J, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Innamorato F, Iodice J, Kissinger JC, ... ... Roos DS, et al. GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis. Nucleic Acids Research. 37: D526-30. PMID 18824479 DOI: 10.1093/Nar/Gkn631 |
0.746 |
|
| 2008 |
Agüero F, Al-Lazikani B, Aslett M, Berriman M, Buckner FS, Campbell RK, Carmona S, Carruthers IM, Chan AW, Chen F, Crowther GJ, Doyle MA, Hertz-Fowler C, Hopkins AL, McAllister G, ... ... Roos DS, et al. Genomic-scale prioritization of drug targets: the TDR Targets database. Nature Reviews. Drug Discovery. 7: 900-7. PMID 18927591 DOI: 10.1038/Nrd2684 |
0.397 |
|
| 2008 |
Xia D, Sanderson SJ, Jones AR, Prieto JH, Yates JR, Bromley E, Tomley FM, Lal K, Sinden RE, Brunk BP, Roos DS, Wastling JM. The proteome of Toxoplasma gondii: integration with the genome provides novel insights into gene expression and annotation. Genome Biology. 9: R116. PMID 18644147 DOI: 10.1186/Gb-2008-9-7-R116 |
0.523 |
|
| 2008 |
Gajria B, Bahl A, Brestelli J, Dommer J, Fischer S, Gao X, Heiges M, Iodice J, Kissinger JC, Mackey AJ, Pinney DF, Roos DS, Stoeckert CJ, Wang H, Brunk BP. ToxoDB: an integrated Toxoplasma gondii database resource. Nucleic Acids Research. 36: D553-6. PMID 18003657 DOI: 10.1093/Nar/Gkm981 |
0.717 |
|
| 2007 |
Chen F, Mackey AJ, Vermunt JK, Roos DS. Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes Plos One. 2. PMID 17440619 DOI: 10.1371/Journal.Pone.0000383 |
0.379 |
|
| 2007 |
Greene JM, Collins F, Lefkowitz EJ, Roos D, Scheuermann RH, Sobral B, Stevens R, White O, Di Francesco V. National Institute of Allergy and Infectious Diseases bioinformatics resource centers: new assets for pathogen informatics. Infection and Immunity. 75: 3212-9. PMID 17420237 DOI: 10.1128/Iai.00105-07 |
0.392 |
|
| 2007 |
Vedadi M, Lew J, Artz J, Amani M, Zhao Y, Dong A, Wasney GA, Gao M, Hills T, Brokx S, Qiu W, Sharma S, Diassiti A, Alam Z, Melone M, ... ... Roos D, et al. Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms. Molecular and Biochemical Parasitology. 151: 100-10. PMID 17125854 DOI: 10.1016/J.Molbiopara.2006.10.011 |
0.355 |
|
| 2007 |
Aurrecoechea C, Heiges M, Wang H, Wang Z, Fischer S, Rhodes P, Miller J, Kraemer E, Stoeckert CJ, Roos DS, Kissinger JC. ApiDB: integrated resources for the apicomplexan bioinformatics resource center. Nucleic Acids Research. 35: D427-30. PMID 17098930 DOI: 10.1093/Nar/Gkl880 |
0.655 |
|
| 2006 |
Stoeckert CJ, Fischer S, Kissinger JC, Heiges M, Aurrecoechea C, Gajria B, Roos DS. PlasmoDB v5: new looks, new genomes. Trends in Parasitology. 22: 543-6. PMID 17029963 DOI: 10.1016/J.Pt.2006.09.005 |
0.656 |
|
| 2006 |
Chen F, Mackey AJ, Stoeckert CJ, Roos DS. OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups Nucleic Acids Research.. 34. PMID 16381887 DOI: 10.1093/Nar/Gkj123 |
0.405 |
|
| 2004 |
Berry AE, Gardner MJ, Caspers GJ, Roos DS, Berriman M. Curation of the Plasmodium falciparum genome Trends in Parasitology. 20: 548-552. PMID 15522662 DOI: 10.1016/J.Pt.2004.09.003 |
0.494 |
|
| 2004 |
Matrajt M, Platt CD, Sagar AD, Lindsay A, Moulton C, Roos DS. Transcript initiation, polyadenylation, and functional promoter mapping for the dihydrofolate reductase-thymidylate synthase gene of Toxoplasma gondii. Molecular and Biochemical Parasitology. 137: 229-38. PMID 15383293 DOI: 10.1016/J.Molbiopara.2003.12.015 |
0.314 |
|
| 2004 |
Gunasekera AM, Patankar S, Schug J, Eisen G, Kissinger J, Roos D, Wirth DF. Widespread distribution of antisense transcripts in the Plasmodium falciparum genome. Molecular and Biochemical Parasitology. 136: 35-42. PMID 15138065 DOI: 10.1016/J.Molbiopara.2004.02.007 |
0.631 |
|
| 2004 |
Li L, Crabtree J, Fischer S, Pinney D, Stoeckert CJ, Sibley LD, Roos DS. ApiEST-DB: Analyzing clustered EST data of the apicomplexan parasites Nucleic Acids Research. 32. PMID 14681425 DOI: 10.1093/Nar/Gkh112 |
0.48 |
|
| 2003 |
Li L, Stoeckert CJ, Roos DS. OrthoMCL: Identification of ortholog groups for eukaryotic genomes Genome Research. 13: 2178-2189. PMID 12952885 DOI: 10.1101/Gr.1224503 |
0.512 |
|
| 2003 |
Li L, Brunk BP, Kissinger JC, Pape D, Tang K, Cole RH, Martin J, Wylie T, Dante M, Fogarty SJ, Howe DK, Liberator P, Diaz C, Anderson J, White M, ... ... Roos DS, et al. Gene discovery in the apicomplexa as revealed by EST sequencing and assembly of a comparative gene database. Genome Research. 13: 443-54. PMID 12618375 DOI: 10.1101/Gr.693203 |
0.56 |
|
| 2003 |
Kissinger JC, Gajria B, Li L, Paulsen IT, Roos DS. ToxoDB: accessing the Toxoplasma gondii genome. Nucleic Acids Research. 31: 234-6. PMID 12519989 DOI: 10.1093/nar/gkg072 |
0.694 |
|
| 2003 |
Bahl A, Brunk B, Crabtree J, Fraunholz MJ, Gajria B, Grant GR, Ginsburg H, Gupta D, Kissinger JC, Labo P, Li L, Mailman MD, Milgram AJ, Pearson DS, Roos DS, et al. PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Research. 31: 212-5. PMID 12519984 DOI: 10.1093/Nar/Gkg081 |
0.736 |
|
| 2002 |
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, ... ... Roos DS, et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 419: 498-511. PMID 12368864 DOI: 10.1038/Nature01097 |
0.475 |
|
| 2002 |
Kissinger JC, Brunk BP, Crabtree J, Fraunholz MJ, Gajria B, Milgram AJ, Pearson DS, Schug J, Bahl A, Diskin SJ, Ginsburg H, Grant GR, Gupta D, Labo P, Li L, ... ... Roos DS, et al. The Plasmodium genome database. Nature. 419: 490-2. PMID 12368860 DOI: 10.1038/419490A |
0.688 |
|
| 2002 |
Joiner KA, Roos DS. Secretory traffic in the eukaryotic parasite Toxoplasma gondii: less is more. The Journal of Cell Biology. 157: 557-63. PMID 12011107 DOI: 10.1083/jcb.200112144 |
0.304 |
|
| 2002 |
Roos DS, Crawford MJ, Donald RG, Fraunholz M, Harb OS, He CY, Kissinger JC, Shaw MK, Striepen B. Mining the Plasmodium genome database to define organellar function: what does the apicoplast do? Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 357: 35-46. PMID 11839180 DOI: 10.1098/rstb.2001.1047 |
0.663 |
|
| 2002 |
Bahl A, Brunk B, Coppel RL, Crabtree J, Diskin SJ, Fraunholz MJ, Grant GR, Gupta D, Huestis RL, Kissinger JC, Labo P, Li L, McWeeney SK, Milgram AJ, Roos DS, et al. PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Research. 30: 87-90. PMID 11752262 DOI: 10.1093/Nar/30.1.87 |
0.732 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2005 |
Khan A, Taylor S, Su C, Mackey AJ, Boyle J, Cole R, Glover D, Tang K, Paulsen IT, Berriman M, Boothroyd JC, Pfefferkorn ER, Dubey JP, Ajioka JW, Roos DS, et al. Composite genome map and recombination parameters derived from three archetypal lineages of Toxoplasma gondii. Nucleic Acids Research. 33: 2980-92. PMID 15911631 DOI: 10.1093/Nar/Gki604 |
0.278 |
|
| 2006 |
Khan A, Böhme U, Kelly KA, Adlem E, Brooks K, Simmonds M, Mungall K, Quail MA, Arrowsmith C, Chillingworth T, Churcher C, Harris D, Collins M, Fosker N, Fraser A, ... ... Roos DS, et al. Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii. Genome Research. 16: 1119-25. PMID 16902086 DOI: 10.1101/Gr.5318106 |
0.276 |
|
| 2012 |
Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J. Toward community standards in the quest for orthologs. Bioinformatics (Oxford, England). 28: 900-4. PMID 22332236 DOI: 10.1093/Bioinformatics/Bts050 |
0.266 |
|
| 2011 |
Fernández Robledo JA, Caler E, Matsuzaki M, Keeling PJ, Shanmugam D, Roos DS, Vasta GR. The search for the missing link: a relic plastid in Perkinsus? International Journal For Parasitology. 41: 1217-29. PMID 21889509 DOI: 10.1016/J.Ijpara.2011.07.008 |
0.264 |
|
| 2008 |
Liu Q, Crammer K, Pereira FC, Roos DS. Reranking candidate gene models with cross-species comparison for improved gene prediction. Bmc Bioinformatics. 9: 433. PMID 18854050 DOI: 10.1186/1471-2105-9-433 |
0.253 |
|
| 2014 |
Beiting DP, Peixoto L, Akopyants NS, Beverley SM, Wherry EJ, Christian DA, Hunter CA, Brodsky IE, Roos DS. Differential induction of TLR3-dependent innate immune signaling by closely related parasite species. Plos One. 9: e88398. PMID 24505488 DOI: 10.1371/Journal.Pone.0088398 |
0.248 |
|
| 2009 |
Peterson ME, Chen F, Saven JG, Roos DS, Babbitt PC, Sali A. Evolutionary constraints on structural similarity in orthologs and paralogs. Protein Science : a Publication of the Protein Society. 18: 1306-15. PMID 19472362 DOI: 10.1002/Pro.143 |
0.239 |
|
| 2015 |
Novais FO, Carvalho LP, Passos S, Roos DS, Carvalho EM, Scott P, Beiting DP. Genomic profiling of human Leishmania braziliensis lesions identifies transcriptional modules associated with cutaneous immunopathology. The Journal of Investigative Dermatology. 135: 94-101. PMID 25036052 DOI: 10.1038/Jid.2014.305 |
0.234 |
|
| 2011 |
Jammallo L, Eidell K, Davis PH, Dufort FJ, Cronin C, Thirugnanam S, Chiles TC, Roos DS, Gubbels MJ. An insertional trap for conditional gene expression in Toxoplasma gondii: identification of TAF250 as an essential gene. Molecular and Biochemical Parasitology. 175: 133-43. PMID 21035508 DOI: 10.1016/j.molbiopara.2010.10.007 |
0.22 |
|
| 2012 |
Pszenny V, Davis PH, Zhou XW, Hunter CA, Carruthers VB, Roos DS. Targeted disruption of Toxoplasma gondii serine protease inhibitor 1 increases bradyzoite cyst formation in vitro and parasite tissue burden in mice. Infection and Immunity. 80: 1156-65. PMID 22202120 DOI: 10.1128/Iai.06167-11 |
0.218 |
|
| 2006 |
Boyle JP, Rajasekar B, Saeij JP, Ajioka JW, Berriman M, Paulsen I, Roos DS, Sibley LD, White MW, Boothroyd JC. Just one cross appears capable of dramatically altering the population biology of a eukaryotic pathogen like Toxoplasma gondii. Proceedings of the National Academy of Sciences of the United States of America. 103: 10514-9. PMID 16801557 DOI: 10.1073/Pnas.0510319103 |
0.215 |
|
| 2006 |
Chaudhary K, Ting LM, Kim K, Roos DS. Toxoplasma gondii purine nucleoside phosphorylase biochemical characterization, inhibitor profiles, and comparison with the Plasmodium falciparum ortholog. The Journal of Biological Chemistry. 281: 25652-8. PMID 16829527 DOI: 10.1074/Jbc.M602624200 |
0.209 |
|
| 2005 |
Radke JR, Behnke MS, Mackey AJ, Radke JB, Roos DS, White MW. The transcriptome of Toxoplasma gondii Bmc Biology. 3. PMID 16324218 DOI: 10.1186/1741-7007-3-26 |
0.208 |
|
| 2013 |
Klinger CM, Nisbet RE, Ouologuem DT, Roos DS, Dacks JB. Cryptic organelle homology in apicomplexan parasites: insights from evolutionary cell biology. Current Opinion in Microbiology. 16: 424-31. PMID 23932202 DOI: 10.1016/J.Mib.2013.07.015 |
0.205 |
|
| 2003 |
Drozdowicz YM, Shaw M, Nishi M, Striepen B, Liwinski HA, Roos DS, Rea PA. Isolation and characterization of TgVP1, a type I vacuolar H+-translocating pyrophosphatase from Toxoplasma gondii. The dynamics of its subcellular localization and the cellular effects of a diphosphonate inhibitor. The Journal of Biological Chemistry. 278: 1075-85. PMID 12411435 DOI: 10.1074/jbc.M209436200 |
0.203 |
|
| 2009 |
Chandramohanadas R, Davis PH, Beiting DP, Harbut MB, Darling C, Velmourougane G, Lee MY, Greer PA, Roos DS, Greenbaum DC. Apicomplexan parasites co-opt host calpains to facilitate their escape from infected cells. Science (New York, N.Y.). 324: 794-7. PMID 19342550 DOI: 10.1126/Science.1171085 |
0.2 |
|
| 2015 |
Checkley W, White AC, Jaganath D, Arrowood MJ, Chalmers RM, Chen XM, Fayer R, Griffiths JK, Guerrant RL, Hedstrom L, Huston CD, Kotloff KL, Kang G, Mead JR, Miller M, ... ... Roos DS, et al. A review of the global burden, novel diagnostics, therapeutics, and vaccine targets for cryptosporidium. The Lancet. Infectious Diseases. 15: 85-94. PMID 25278220 DOI: 10.1016/S1473-3099(14)70772-8 |
0.197 |
|
| 2018 |
Lykins JD, Filippova EV, Halavaty AS, Minasov G, Zhou Y, Dubrovska I, Flores KJ, Shuvalova LA, Ruan J, El Bissati K, Dovgin S, Roberts CW, Woods S, Moulton JD, Moulton H, ... ... Roos DS, et al. CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in . Frontiers in Cellular and Infection Microbiology. 8: 352. PMID 30345257 DOI: 10.3389/Fcimb.2018.00352 |
0.195 |
|
| 2006 |
Hu K, Johnson J, Florens L, Fraunholz M, Suravajjala S, DiLullo C, Yates J, Roos DS, Murray JM. Cytoskeletal components of an invasion machine--the apical complex of Toxoplasma gondii. Plos Pathogens. 2: e13. PMID 16518471 DOI: 10.1371/journal.ppat.0020013 |
0.194 |
|
| 2007 |
Elsik CG, Mackey AJ, Reese JT, Milshina NV, Roos DS, Weinstock GM. Creating a honey bee consensus gene set. Genome Biology. 8: R13. PMID 17241472 DOI: 10.1186/Gb-2007-8-1-R13 |
0.189 |
|
| 2018 |
Coffey MJ, Dagley LF, Seizova S, Kapp EA, Infusini G, Roos DS, Boddey JA, Webb AI, Tonkin CJ. Aspartyl Protease 5 Matures Dense Granule Proteins That Reside at the Host-Parasite Interface in Toxoplasma gondii. Mbio. 9. PMID 30377279 DOI: 10.1128/mBio.01796-18 |
0.185 |
|
| 2002 |
Hu K, Mann T, Striepen B, Beckers CJ, Roos DS, Murray JM. Daughter cell assembly in the protozoan parasite Toxoplasma gondii. Molecular Biology of the Cell. 13: 593-606. PMID 11854415 DOI: 10.1091/mbc.01-06-0309 |
0.183 |
|
| 2002 |
Matrajt M, Donald RG, Singh U, Roos DS. Identification and characterization of differentiation mutants in the protozoan parasite Toxoplasma gondii. Molecular Microbiology. 44: 735-47. PMID 11994154 DOI: 10.1046/J.1365-2958.2002.02904.X |
0.181 |
|
| 2008 |
Nishi M, Hu K, Murray JM, Roos DS. Organellar dynamics during the cell cycle of Toxoplasma gondii. Journal of Cell Science. 121: 1559-68. PMID 18411248 DOI: 10.1242/jcs.021089 |
0.178 |
|
| 2011 |
Khan A, Miller N, Roos DS, Dubey JP, Ajzenberg D, Dardé ML, Ajioka JW, Rosenthal B, Sibley LD. A monomorphic haplotype of chromosome Ia is associated with widespread success in clonal and nonclonal populations of Toxoplasma gondii. Mbio. 2: e00228-11. PMID 22068979 DOI: 10.1128/mBio.00228-11 |
0.176 |
|
| 2003 |
Wojczyk BS, Stwora-Wojczyk MM, Hagen FK, Striepen B, Hang HC, Bertozzi CR, Roos DS, Spitalnik SL. cDNA cloning and expression of UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase T1 from Toxoplasma gondii. Molecular and Biochemical Parasitology. 131: 93-107. PMID 14511808 DOI: 10.1016/S0166-6851(03)00196-8 |
0.174 |
|
| 2013 |
Gregg B, Taylor BC, John B, Tait-Wojno ED, Girgis NM, Miller N, Wagage S, Roos DS, Hunter CA. Replication and distribution of Toxoplasma gondii in the small intestine after oral infection with tissue cysts. Infection and Immunity. 81: 1635-43. PMID 23460516 DOI: 10.1128/Iai.01126-12 |
0.168 |
|
| 2006 |
Crawford MJ, Thomsen-Zieger N, Ray M, Schachtner J, Roos DS, Seeber F. Toxoplasma gondii scavenges host-derived lipoic acid despite its de novo synthesis in the apicoplast. The Embo Journal. 25: 3214-22. PMID 16778769 DOI: 10.1038/Sj.Emboj.7601189 |
0.167 |
|
| 2015 |
Beiting DP, Hidano S, Baggs JE, Geskes JM, Fang Q, Wherry EJ, Hunter CA, Roos DS, Cherry S. The Orphan Nuclear Receptor TLX Is an Enhancer of STAT1-Mediated Transcription and Immunity to Toxoplasma gondii. Plos Biology. 13: e1002200. PMID 26196739 DOI: 10.1371/Journal.Pbio.1002200 |
0.161 |
|
| 2011 |
Imam S, Chen Z, Roos DS, Pohlschröder M. Identification of surprisingly diverse type IV pili, across a broad range of gram-positive bacteria. Plos One. 6: e28919. PMID 22216142 DOI: 10.1371/Journal.Pone.0028919 |
0.158 |
|
| 2004 |
Stwora-Wojczyk MM, Dzierszinski F, Roos DS, Spitalnik SL, Wojczyk BS. Functional characterization of a novel Toxoplasma gondii glycosyltransferase: UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-T3. Archives of Biochemistry and Biophysics. 426: 231-40. PMID 15158673 DOI: 10.1016/j.abb.2004.02.013 |
0.157 |
|
| 2013 |
Ospina-Álvarez A, Bernal M, Catalán IA, Roos D, Bigot JL, Palomera I. Modeling fish egg production and spatial distribution from acoustic data: a step forward into the analysis of recruitment. Plos One. 8: e73687. PMID 24066063 DOI: 10.1371/Journal.Pone.0073687 |
0.155 |
|
| 2002 |
Shaw MK, Roos DS, Tilney LG. Cysteine and serine protease inhibitors block intracellular development and disrupt the secretory pathway of Toxoplasma gondii. Microbes and Infection / Institut Pasteur. 4: 119-32. PMID 11880042 DOI: 10.1016/S1286-4579(01)01520-9 |
0.15 |
|
| 2008 |
Liu Q, Mackey AJ, Roos DS, Pereira FC. Evigan: a hidden variable model for integrating gene evidence for eukaryotic gene prediction. Bioinformatics (Oxford, England). 24: 597-605. PMID 18187439 DOI: 10.1093/bioinformatics/btn004 |
0.148 |
|
| 2018 |
Shukla A, Olszewski KL, Llinás M, Rommereim LM, Fox BA, Bzik DJ, Xia D, Wastling J, Beiting D, Roos DS, Shanmugam D. Glycolysis is important for optimal asexual growth and formation of mature tissue cysts by Toxoplasma gondii. International Journal For Parasitology. PMID 30176233 DOI: 10.1016/J.Ijpara.2018.05.013 |
0.147 |
|
| 2020 |
Chen L, Christian DA, Kochanowsky JA, Phan AT, Clark JT, Wang S, Berry C, Oh J, Chen X, Roos DS, Beiting DP, Koshy AA, Hunter CA. The Toxoplasma gondii virulence factor ROP16 acts in cis and trans, and suppresses T cell responses. The Journal of Experimental Medicine. 217. PMID 31961916 DOI: 10.1084/Jem.20181757 |
0.146 |
|
| 2004 |
Chaudhary K, Darling JA, Fohl LM, Sullivan WJ, Donald RG, Pfefferkorn ER, Ullman B, Roos DS. Purine salvage pathways in the apicomplexan parasite Toxoplasma gondii. The Journal of Biological Chemistry. 279: 31221-7. PMID 15140885 DOI: 10.1074/jbc.M404232200 |
0.144 |
|
| 2010 |
Guiguemde WA, Shelat AA, Bouck D, Duffy S, Crowther GJ, Davis PH, Smithson DC, Connelly M, Clark J, Zhu F, Jiménez-DÃaz MB, Martinez MS, Wilson EB, Tripathi AK, Gut J, ... ... Roos DS, et al. Chemical genetics of Plasmodium falciparum. Nature. 465: 311-5. PMID 20485428 DOI: 10.1038/Nature09099 |
0.141 |
|
| 2011 |
Baumeister S, Wiesner J, Reichenberg A, Hintz M, Bietz S, Harb OS, Roos DS, Kordes M, Friesen J, Matuschewski K, Lingelbach K, Jomaa H, Seeber F. Fosmidomycin uptake into Plasmodium and Babesia-infected erythrocytes is facilitated by parasite-induced new permeability pathways. Plos One. 6: e19334. PMID 21573242 DOI: 10.1371/journal.pone.0019334 |
0.139 |
|
| 2008 |
Saito T, Nishi M, Lim MI, Wu B, Maeda T, Hashimoto H, Takeuchi T, Roos DS, Asai T. A novel GDP-dependent pyruvate kinase isozyme from Toxoplasma gondii localizes to both the apicoplast and the mitochondrion. The Journal of Biological Chemistry. 283: 14041-52. PMID 18326043 DOI: 10.1074/jbc.M709015200 |
0.135 |
|
| 2014 |
Lynch M, Field MC, Goodson HV, Malik HS, Pereira-Leal JB, Roos DS, Turkewitz AP, Sazer S. Evolutionary cell biology: two origins, one objective. Proceedings of the National Academy of Sciences of the United States of America. 111: 16990-4. PMID 25404324 DOI: 10.1073/Pnas.1415861111 |
0.131 |
|
| 2003 |
Foth BJ, Ralph SA, Tonkin CJ, Struck NS, Fraunholz M, Roos DS, Cowman AF, McFadden GI. Dissecting apicoplast targeting in the malaria parasite Plasmodium falciparum. Science (New York, N.Y.). 299: 705-8. PMID 12560551 DOI: 10.1126/science.1078599 |
0.131 |
|
| 2004 |
Wang Q, Brown S, Roos DS, Nussenzweig V, Bhanot P. Transcriptome of axenic liver stages of Plasmodium yoelii. Molecular and Biochemical Parasitology. 137: 161-8. PMID 15279962 DOI: 10.1016/J.Molbiopara.2004.06.001 |
0.131 |
|
| 2002 |
Pelletier L, Stern CA, Pypaert M, Sheff D, Ngô HM, Roper N, He CY, Hu K, Toomre D, Coppens I, Roos DS, Joiner KA, Warren G. Golgi biogenesis in Toxoplasma gondii. Nature. 418: 548-52. PMID 12152082 DOI: 10.1038/Nature00946 |
0.128 |
|
| 2010 |
Shanmugam D, Wu B, Ramirez U, Jaffe EK, Roos DS. Plastid-associated porphobilinogen synthase from Toxoplasma gondii: Kinetic and structural properties validate therapeutic potential Journal of Biological Chemistry. 285: 22122-22131. PMID 20442414 DOI: 10.1074/jbc.M110.107243 |
0.124 |
|
| 2015 |
Pszenny V, Ehrenman K, Romano JD, Kennard A, Schultz A, Roos DS, Grigg ME, Carruthers VB, Coppens I. A Lipolytic Lecithin:Cholesterol Acyltransferase Secreted by Toxoplasma Facilitates Parasite Replication and Egress. The Journal of Biological Chemistry. PMID 26694607 DOI: 10.1074/Jbc.M115.671974 |
0.124 |
|
| 2010 |
Zhang M, Fennell C, Ranford-Cartwright L, Sakthivel R, Gueirard P, Meister S, Caspi A, Doerig C, Nussenzweig RS, Tuteja R, Sullivan WJ, Roos DS, Fontoura BM, Ménard R, Winzeler EA, et al. The Plasmodium eukaryotic initiation factor-2alpha kinase IK2 controls the latency of sporozoites in the mosquito salivary glands. The Journal of Experimental Medicine. 207: 1465-74. PMID 20584882 DOI: 10.1084/Jem.20091975 |
0.122 |
|
| 2007 |
Cook T, Roos D, Morada M, Zhu G, Keithly JS, Feagin JE, Wu G, Yarlett N. Divergent polyamine metabolism in the Apicomplexa. Microbiology (Reading, England). 153: 1123-30. PMID 17379721 DOI: 10.1099/Mic.0.2006/001768-0 |
0.121 |
|
| 2004 |
Harb OS, Chatterjee B, Fraunholz MJ, Crawford MJ, Nishi M, Roos DS. Multiple functionally redundant signals mediate targeting to the apicoplast in the apicomplexan parasite Toxoplasma gondii. Eukaryotic Cell. 3: 663-74. PMID 15189987 DOI: 10.1128/EC.3.3.663-674.2004 |
0.12 |
|
| 2021 |
Harb OS, Roos DS. ToxoDB: Functional Genomics Resource for Toxoplasma and Related Organisms. Methods in Molecular Biology (Clifton, N.J.). 2071: 27-47. PMID 31758445 DOI: 10.1007/978-1-4939-9857-9_2 |
0.12 |
|
| 2016 |
Chen LZ, Roos D, Philip E. Development of Immunocapture-LC/MS Assay for Simultaneous ADA Isotyping and Semiquantitation. Journal of Immunology Research. 2016: 7682472. PMID 27034966 DOI: 10.1155/2016/7682472 |
0.12 |
|
| 2015 |
Harb OS, Roos DS. The Eukaryotic Pathogen Databases: a functional genomic resource integrating data from human and veterinary parasites. Methods in Molecular Biology (Clifton, N.J.). 1201: 1-18. PMID 25388105 DOI: 10.1007/978-1-4939-1438-8_1 |
0.12 |
|
| 2014 |
Ouologuem DT, Roos DS. Dynamics of the Toxoplasma gondii inner membrane complex. Journal of Cell Science. 127: 3320-30. PMID 24928899 DOI: 10.1242/jcs.147736 |
0.12 |
|
| 2011 |
Beiting DP, Roos DS. A systems biological view of intracellular pathogens. Immunological Reviews. 240: 117-28. PMID 21349090 DOI: 10.1111/j.1600-065X.2010.00998.x |
0.12 |
|
| 2011 |
Roos D. David Roos. Interview by H. Craig Mak. Nature Biotechnology. 29: 141-2. PMID 21301442 DOI: 10.1038/nbt.1774 |
0.12 |
|
| 2008 |
Chen Z, Harb OS, Roos DS. In silico identification of specialized secretory-organelle proteins in apicomplexan parasites and in vivo validation in Toxoplasma gondii. Plos One. 3: e3611. PMID 18974850 DOI: 10.1371/journal.pone.0003611 |
0.12 |
|
| 2007 |
Luschi P, Benhamou S, Girard C, Ciccione S, Roos D, Sudre J, Benvenuti S. Marine turtles use geomagnetic cues during open-sea homing. Current Biology : Cb. 17: 126-33. PMID 17240337 DOI: 10.1016/j.cub.2006.11.062 |
0.12 |
|
| 2005 |
Chaudhary K, Roos DS. Protozoan genomics for drug discovery. Nature Biotechnology. 23: 1089-91. PMID 16151400 DOI: 10.1038/nbt0905-1089 |
0.12 |
|
| 2005 |
Roos DS. Genetics. Themes and variations in apicomplexan parasite biology. Science (New York, N.Y.). 309: 72-3. PMID 15994520 DOI: 10.1126/science.1115252 |
0.12 |
|
| 2005 |
Chaudhary K, Donald RG, Nishi M, Carter D, Ullman B, Roos DS. Differential localization of alternatively spliced hypoxanthine-xanthine-guanine phosphoribosyltransferase isoforms in Toxoplasma gondii. The Journal of Biological Chemistry. 280: 22053-9. PMID 15814612 DOI: 10.1074/jbc.M503178200 |
0.12 |
|
| 2005 |
Coppel RL, Roos DS, Bozdech Z. The genomics of malaria infection. Trends in Parasitology. 20: 553-7. PMID 15522663 DOI: 10.1016/j.pt.2004.10.002 |
0.12 |
|
| 2005 |
Dzierszinski F, Nishi M, Ouko L, Roos DS. Dynamics of Toxoplasma gondii differentiation. Eukaryotic Cell. 3: 992-1003. PMID 15302832 DOI: 10.1128/EC.3.4.992-1003.2004 |
0.12 |
|
| 2004 |
Fraunholz MJ, Roos DS. PlasmoDB: exploring genomics and post-genomics data of the malaria parasite, Plasmodium falciparum. Redox Report : Communications in Free Radical Research. 8: 317-20. PMID 14962373 DOI: 10.1179/135100003225002961 |
0.12 |
|
| 2004 |
Fohl LM, Roos DS. Fitness effects of DHFR-TS mutations associated with pyrimethamine resistance in apicomplexan parasites. Molecular Microbiology. 50: 1319-27. PMID 14622418 DOI: 10.1046/j.1365-2958.2003.03756.x |
0.12 |
|
| 2002 |
Matrajt M, Nishi M, Fraunholz MJ, Peter O, Roos DS. Amino-terminal control of transgenic protein expression levels in Toxoplasma gondii. Molecular and Biochemical Parasitology. 120: 285-9. PMID 11897133 DOI: 10.1016/s0166-6851(02)00014-2 |
0.12 |
|
| 2014 |
Saraux C, Fromentin JM, Bigot JL, Bourdeix JH, Morfin M, Roos D, Van Beveren E, Bez N. Spatial structure and distribution of small pelagic fish in the northwestern Mediterranean Sea. Plos One. 9: e111211. PMID 25375656 DOI: 10.1371/Journal.Pone.0111211 |
0.116 |
|
| 2004 |
Pepper M, Dzierszinski F, Crawford A, Hunter CA, Roos D. Development of a system to study CD4+-T-cell responses to transgenic ovalbumin-expressing Toxoplasma gondii during toxoplasmosis. Infection and Immunity. 72: 7240-6. PMID 15557649 DOI: 10.1128/Iai.72.12.7240-7246.2004 |
0.115 |
|
| 2002 |
Hu K, Roos DS, Murray JM. A novel polymer of tubulin forms the conoid of Toxoplasma gondii. The Journal of Cell Biology. 156: 1039-50. PMID 11901169 DOI: 10.1083/jcb.200112086 |
0.111 |
|
| 2002 |
Swedlow JR, Hu K, Andrews PD, Roos DS, Murray JM. Measuring tubulin content in Toxoplasma gondii: a comparison of laser-scanning confocal and wide-field fluorescence microscopy. Proceedings of the National Academy of Sciences of the United States of America. 99: 2014-9. PMID 11830634 DOI: 10.1073/pnas.022554999 |
0.111 |
|
| 2004 |
Ralph SA, van Dooren GG, Waller RF, Crawford MJ, Fraunholz MJ, Foth BJ, Tonkin CJ, Roos DS, McFadden GI. Tropical infectious diseases: metabolic maps and functions of the Plasmodium falciparum apicoplast. Nature Reviews. Microbiology. 2: 203-16. PMID 15083156 DOI: 10.1038/nrmicro843 |
0.11 |
|
| 2016 |
Bandini G, Haserick JR, Motari E, Ouologuem DT, Lourido S, Roos DS, Costello CE, Robbins PW, Samuelson J. O-fucosylated glycoproteins form assemblies in close proximity to the nuclear pore complexes of Toxoplasma gondii. Proceedings of the National Academy of Sciences of the United States of America. PMID 27663739 DOI: 10.1073/Pnas.1613653113 |
0.109 |
|
| 2011 |
Gregg B, Dzierszinski F, Tait E, Jordan KA, Hunter CA, Roos DS. Subcellular antigen location influences T-cell activation during acute infection with Toxoplasma gondii. Plos One. 6: e22936. PMID 21829561 DOI: 10.1371/Journal.Pone.0022936 |
0.108 |
|
| 2013 |
Novais FO, Carvalho LP, Graff JW, Beiting DP, Ruthel G, Roos DS, Betts MR, Goldschmidt MH, Wilson ME, de Oliveira CI, Scott P. Cytotoxic T cells mediate pathology and metastasis in cutaneous leishmaniasis. Plos Pathogens. 9: e1003504. PMID 23874205 DOI: 10.1371/Journal.Ppat.1003504 |
0.108 |
|
| 2004 |
McKee AS, Dzierszinski F, Boes M, Roos DS, Pearce EJ. Functional inactivation of immature dendritic cells by the intracellular parasite Toxoplasma gondii. Journal of Immunology (Baltimore, Md. : 1950). 173: 2632-40. PMID 15294980 |
0.106 |
|
| 2004 |
Hu K, Roos DS, Angel SO, Murray JM. Variability and heritability of cell division pathways in Toxoplasma gondii. Journal of Cell Science. 117: 5697-705. PMID 15494366 DOI: 10.1242/jcs.01494 |
0.105 |
|
| 2007 |
Deitsch K, Duraisingh M, Dzikowski R, Gunasekera A, Khan S, Le Roch K, Llinás M, Mair G, McGovern V, Roos D, Shock J, Sims J, Wiegand R, Winzeler E. Mechanisms of gene regulation in Plasmodium. The American Journal of Tropical Medicine and Hygiene. 77: 201-8. PMID 17690387 |
0.102 |
|
| 2020 |
Nankabirwa JI, Arinaitwe E, Rek J, Kilama M, Kizza T, Staedke SG, Rosenthal PJ, Rodriguez-Barraquer I, Briggs J, Greenhouse B, Bousema T, Drakeley C, Roos DS, Tomko SS, Smith DL, et al. Malaria Transmission, Infection, and Disease following Sustained Indoor Residual Spraying of Insecticide in Tororo, Uganda. The American Journal of Tropical Medicine and Hygiene. PMID 32700666 DOI: 10.4269/Ajtmh.20-0250 |
0.101 |
|
| 2007 |
Dzierszinski F, Pepper M, Stumhofer JS, LaRosa DF, Wilson EH, Turka LA, Halonen SK, Hunter CA, Roos DS. Presentation of Toxoplasma gondii antigens via the endogenous major histocompatibility complex class I pathway in nonprofessional and professional antigen-presenting cells. Infection and Immunity. 75: 5200-9. PMID 17846116 DOI: 10.1128/Iai.00954-07 |
0.097 |
|
| 2008 |
Pepper M, Dzierszinski F, Wilson E, Tait E, Fang Q, Yarovinsky F, Laufer TM, Roos D, Hunter CA. Plasmacytoid dendritic cells are activated by Toxoplasma gondii to present antigen and produce cytokines. Journal of Immunology (Baltimore, Md. : 1950). 180: 6229-36. PMID 18424745 DOI: 10.4049/Jimmunol.180.9.6229 |
0.093 |
|
| 2010 |
Tait ED, Jordan KA, Dupont CD, Harris TH, Gregg B, Wilson EH, Pepper M, Dzierszinski F, Roos DS, Hunter CA. Virulence of Toxoplasma gondii is associated with distinct dendritic cell responses and reduced numbers of activated CD8+ T cells. Journal of Immunology (Baltimore, Md. : 1950). 185: 1502-12. PMID 20592284 DOI: 10.4049/Jimmunol.0903450 |
0.092 |
|
| 2004 |
Tongren JE, Zavala F, Roos DS, Riley EM. Malaria vaccines: if at first you don't succeed... Trends in Parasitology. 20: 604-10. PMID 15522671 DOI: 10.1016/j.pt.2004.09.005 |
0.089 |
|
| 2009 |
John B, Harris TH, Tait ED, Wilson EH, Gregg B, Ng LG, Mrass P, Roos DS, Dzierszinski F, Weninger W, Hunter CA. Dynamic Imaging of CD8(+) T cells and dendritic cells during infection with Toxoplasma gondii. Plos Pathogens. 5: e1000505. PMID 19578440 DOI: 10.1371/Journal.Ppat.1000505 |
0.089 |
|
| 2011 |
Jaffe EK, Shanmugam D, Gardberg A, Dieterich S, Sankaran B, Stewart LJ, Myler PJ, Roos DS. Crystal structure of Toxoplasma gondii porphobilinogen synthase: insights on octameric structure and porphobilinogen formation. The Journal of Biological Chemistry. 286: 15298-307. PMID 21383008 DOI: 10.1074/jbc.M111.226225 |
0.088 |
|
| 2008 |
Maeda T, Saito T, Harb OS, Roos DS, Takeo S, Suzuki H, Tsuboi T, Takeuchi T, Asai T. Pyruvate kinase type-II isozyme in Plasmodium falciparum localizes to the apicoplast. Parasitology International. 58: 101-5. PMID 19015045 DOI: 10.1016/j.parint.2008.10.005 |
0.088 |
|
| 2009 |
Wilson EH, Harris TH, Mrass P, John B, Tait ED, Wu GF, Pepper M, Wherry EJ, Dzierzinski F, Roos D, Haydon PG, Laufer TM, Weninger W, Hunter CA. Behavior of parasite-specific effector CD8+ T cells in the brain and visualization of a kinesis-associated system of reticular fibers. Immunity. 30: 300-11. PMID 19167248 DOI: 10.1016/J.Immuni.2008.12.013 |
0.087 |
|
| 2013 |
Ouologuem DT, Djimdé AA, Diallo N, Doumbo OK, Roos DS. Toxoplasma gondii seroprevalence in Mali. The Journal of Parasitology. 99: 371-4. PMID 22924926 DOI: 10.1645/GE-3239.1 |
0.081 |
|
| 2009 |
Jordan KA, Wilson EH, Tait ED, Fox BA, Roos DS, Bzik DJ, Dzierszinski F, Hunter CA. Kinetics and phenotype of vaccine-induced CD8+ T-cell responses to Toxoplasma gondii. Infection and Immunity. 77: 3894-901. PMID 19528214 DOI: 10.1128/Iai.00024-09 |
0.077 |
|
| 2005 |
Echeverria PC, Matrajt M, Harb OS, Zappia MP, Costas MA, Roos DS, Dubremetz JF, Angel SO. Toxoplasma gondii Hsp90 is a potential drug target whose expression and subcellular localization are developmentally regulated. Journal of Molecular Biology. 350: 723-34. PMID 15967463 DOI: 10.1016/j.jmb.2005.05.031 |
0.071 |
|
| 2005 |
Shapira S, Harb OS, Margarit J, Matrajt M, Han J, Hoffmann A, Freedman B, May MJ, Roos DS, Hunter CA. Initiation and termination of NF-kappaB signaling by the intracellular protozoan parasite Toxoplasma gondii. Journal of Cell Science. 118: 3501-8. PMID 16079291 DOI: 10.1242/Jcs.02428 |
0.071 |
|
| 2014 |
Stelekati E, Shin H, Doering TA, Dolfi DV, Ziegler CG, Beiting DP, Dawson L, Liboon J, Wolski D, Ali MA, Katsikis PD, Shen H, Roos DS, Haining WN, Lauer GM, et al. Bystander chronic infection negatively impacts development of CD8(+) T cell memory. Immunity. 40: 801-13. PMID 24837104 DOI: 10.1016/J.Immuni.2014.04.010 |
0.067 |
|
| 2007 |
Menard LC, Minns LA, Darche S, Mielcarz DW, Foureau DM, Roos D, Dzierszinski F, Kasper LH, Buzoni-Gatel D. B cells amplify IFN-gamma production by T cells via a TNF-alpha-mediated mechanism. Journal of Immunology (Baltimore, Md. : 1950). 179: 4857-66. PMID 17878385 DOI: 10.4049/Jimmunol.179.7.4857 |
0.066 |
|
| 2006 |
Tonkin CJ, Roos DS, McFadden GI. N-terminal positively charged amino acids, but not their exact position, are important for apicoplast transit peptide fidelity in Toxoplasma gondii. Molecular and Biochemical Parasitology. 150: 192-200. PMID 16963133 DOI: 10.1016/j.molbiopara.2006.08.001 |
0.06 |
|
| 2006 |
Hartmann J, Hu K, He CY, Pelletier L, Roos DS, Warren G. Golgi and centrosome cycles in Toxoplasma gondii. Molecular and Biochemical Parasitology. 145: 125-7. PMID 16266757 DOI: 10.1016/J.Molbiopara.2005.09.015 |
0.059 |
|
| 2012 |
Hall AO, Beiting DP, Tato C, John B, Oldenhove G, Lombana CG, Pritchard GH, Silver JS, Bouladoux N, Stumhofer JS, Harris TH, Grainger J, Wojno ED, Wagage S, Roos DS, et al. The cytokines interleukin 27 and interferon-γ promote distinct Treg cell populations required to limit infection-induced pathology. Immunity. 37: 511-23. PMID 22981537 DOI: 10.1016/j.immuni.2012.06.014 |
0.055 |
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| 2022 |
Rosenthal PJ, Björkman A, Dhorda M, Djimde A, Dondorp AM, Gaye O, Guerin PJ, Juma E, Kwiatkowski DP, Merson L, Ntoumi F, Price RN, Raman J, Roos DS, Ter Kuile F, et al. Cooperation in Countering Artemisinin Resistance in Africa: Learning from COVID-19. The American Journal of Tropical Medicine and Hygiene. PMID 35413688 DOI: 10.4269/ajtmh.22-0148 |
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